RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 MDH1BQ5I0G3 518 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 DNTTIP2Q5QJE6 756 aaKnown RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 ATAT1Q5SQI0 421 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 PAQR9Q6ZVX9 377 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 ACOT1Q86TX2 421 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 FUKQ8N0W3 1084 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 SLC35F6Q8N357 371 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 RNF10Q8N5U6 811 aaKnown RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 KIF18AQ8NI77 898 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 RIPOR3Q96MK2 946 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 LPIN3Q9BQK8 851 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 B3GNT5Q9BYG0 378 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 ABI2Q9NYB9 513 aaPredicted RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 DNAI1Q9UI46 699 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 MUTYHQ9UIF7 546 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 SLC27A5Q9Y2P5 690 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 ASB3Q9Y575 518 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 KMT2EQ8IZD2 1858 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 MYO10Q9HD67 2058 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ANKRD62A6NC57 917 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CCL16O15467 120 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 RTN2O75298 545 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 LRG1P02750 347 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CFHP08603 1231 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 PAEPP09466 180 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CYP2F1P24903 491 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ALDH1A3P47895 512 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 TWF1Q12792 350 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 TCEAL1Q15170 157 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ZNF569Q5MCW4 686 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 TRIM72Q6ZMU5 477 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 HFE2Q6ZVN8 426 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 FAM35AQ86V20 835 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 RNF135Q8IUD6 432 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 SPATA2LQ8IUW3 424 aaPredicted RBP11.18□□□□□ -0.62
ATL3-204ENST00000540699 C12orf29Q8N999 325 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ZNF606Q8WXB4 792 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 SECISBP2LQ93073 1101 aaKnown RBP11.18□□□□□ -0.62
ATL3-204ENST00000540699 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 SPATA17Q96L03 361 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 HNRNPABQ99729 332 aaKnown RBP11.18□□□□□ -0.62
ATL3-204ENST00000540699 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 LRRC3Q9BY71 257 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 ZNF518BQ9C0D4 1074 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CSNK1G1Q9HCP0 422 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 WDR6Q9NNW5 1121 aaKnown RBP11.18□□□□□ -0.62
ATL3-204ENST00000540699 TMEM30AQ9NV96 361 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 CAPN6Q9Y6Q1 641 aa11.18□□□□□ -0.62
ATL3-204ENST00000540699 NUP210Q8TEM1 1887 aaPredicted RBP11.18□□□□□ -0.62
ATL3-204ENST00000540699 MYO16Q9Y6X6 1858 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 CLUHO75153 1309 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 MACROD2A1Z1Q3 448 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 TMCO5BA8MYB1 307 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 LOC730098B7Z3J9 87 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 THAP12O43422 761 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 SOAT2O75908 522 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 MOCS3O95396 460 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 FTLP02792 175 aaPredicted RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 PTPN2P17706 415 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 BDNFP23560 247 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 EPHB3P54753 998 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 RPL10AP62906 217 aaKnown RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 NOMO3P69849 1222 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 CENPCQ03188 943 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 ORC1Q13415 861 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 MGAT5BQ3V5L5 792 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 DNAJB7Q7Z6W7 309 aaPredicted RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 TMC8Q8IU68 726 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 LEMD2Q8NC56 503 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 RFFLQ8WZ73 363 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 TFAP2BQ92481 460 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 PSMG2Q969U7 264 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 ARHGEF26Q96DR7 871 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 SMARCD1Q96GM5 515 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 C8orf48Q96LL4 319 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 MYRFLQ96LU7 910 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 POMKQ9H5K3 350 aa11.17□□□□□ -0.62
ATL3-204ENST00000540699 SEPT11Q9NVA2 429 aaKnown RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 DNMT3BQ9UBC3 853 aaKnown RBP11.17□□□□□ -0.62
ATL3-204ENST00000540699 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 CLDN5O00501 218 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 TRIM66O15016 1216 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 MICAL2O94851 1124 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 VDRP11473 427 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 CCDC130P13994 396 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 HMGA1P17096 107 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 BRD2P25440 801 aaKnown RBP11.16□□□□□ -0.62
ATL3-204ENST00000540699 CASQ1P31415 396 aa11.16□□□□□ -0.62
ATL3-204ENST00000540699 GPR15P49685 360 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms