RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 GJA4P35212 333 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ASPAP45381 313 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 SOX9P48436 509 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 GCLMP48507 274 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 NDST1P52848 882 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 SLC5A3P53794 718 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 DLG4P78352 724 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 SIM2Q14190 667 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-208ENST00000540683 EML3Q32P44 896 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 TCERG1LQ5VWI1 586 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 CEP68Q76N32 757 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ACOT1Q86TX2 421 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 WDR5BQ86VZ2 330 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 SUMF1Q8NBK3 374 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 TTC16Q8NEE8 873 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 CYFIP2Q96F07 1278 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 LOXL4Q96JB6 756 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 CEP63Q96MT8 703 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 LRRC3BQ96PB8 259 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 CYP2S1Q96SQ9 504 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
CDCA3-208ENST00000540683 DPEP3Q9H4B8 488 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 IL37Q9NZH6 218 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 KIAA1257Q9ULG3 409 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 MAPK8IP1Q9UQF2 711 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF510Q9Y2H8 683 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 MYH10P35580 1976 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 WDR87Q6ZQQ6 2873 aa10.99□□□□□ -0.65
CDCA3-208ENST00000540683 CFAP54Q96N23 3096 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 ANAPC1Q9H1A4 1944 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 FAM92AA1XBS5 289 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SHISA7A6NL88 538 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 NRG2O14511 850 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 RETP07949 1114 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 ATP5C1P36542 298 aaKnown RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 ID4P47928 161 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 CDR1P51861 262 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 CDH8P55286 799 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 GAD2Q05329 585 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 IFRD2Q12894 506 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 BYSLQ13895 437 aaKnown RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 PUM1Q14671 1186 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 TXNDC11Q6PKC3 985 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SYT13Q7L8C5 426 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 GPIHBP1Q8IV16 184 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 FUKQ8N0W3 1084 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 ZNF276Q8N554 614 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 TTC8Q8TAM2 541 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SPATA20Q8TB22 786 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 PLEKHO2Q8TD55 490 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SLC2A14Q8TDB8 520 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 FAM84AQ96KN4 292 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 FAM81BQ96LP2 452 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 GOLPH3LQ9H4A5 285 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 HPS4Q9NQG7 708 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 HESX1Q9UBX0 185 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 SCML2Q9UQR0 700 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
CDCA3-208ENST00000540683 CPQQ9Y646 472 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 GVINP1Q7Z2Y8 2422 aa10.98□□□□□ -0.65
CDCA3-208ENST00000540683 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 CLDN5O00501 218 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 TNFRSF10BO14763 440 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 P4HA2O15460 535 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 HCRTO43612 131 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 CILPO75339 1184 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 APBB3O95704 486 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 APODP05090 189 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 ARSAP15289 507 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 PRCPP42785 496 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 RAP1GAPP47736 663 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 GALK1P51570 392 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 MAP3K7CLP57077 242 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 USP46P62068 366 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 MRPS21P82921 87 aaKnown RBP10.97□□□□□ -0.65
CDCA3-208ENST00000540683 SATB1Q01826 763 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 PNOCQ13519 176 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 STILQ15468 1287 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 DCAF17Q5H9S7 520 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-208ENST00000540683 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 PRR23BQ6ZRT6 265 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 CACNA2D4Q7Z3S7 1137 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 TRIML1Q8N9V2 468 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 XPO6Q96QU8 1125 aaKnown RBP10.97□□□□□ -0.65
CDCA3-208ENST00000540683 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 PNKPQ96T60 521 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 DCLK3Q9C098 648 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 MMRN2Q9H8L6 949 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 CFAP97Q9P2B7 532 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 EBF1Q9UH73 591 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
CDCA3-208ENST00000540683 WNT6Q9Y6F9 365 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms