RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 DENND2AQ9ULE3 1009 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 B3GNT3Q9Y2A9 372 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 CPQQ9Y646 472 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ANKRD31Q8N7Z5 1873 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PSME4Q14997 1843 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 GOLGA8JA6NMD2 632 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 KRT6AP02538 564 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 KRT6BP04259 564 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CD247P20963 164 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MLLT3P42568 568 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 NUBP1P53384 320 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 PHC1P78364 1004 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CDK16Q00536 496 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TFAP4Q01664 338 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GNA13Q14344 377 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 OGFRL1Q5TC84 451 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 DGLUCYQ7Z3D6 616 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 SLFN11Q7Z7L1 901 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 NT5DC3Q86UY8 548 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GIMAP8Q8ND71 665 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ANKRD49Q8WVL7 239 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 HERVK_113Q902F9 699 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 KRT35Q92764 455 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TP53INP1Q96A56 240 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MAP6Q96JE9 813 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 UCKL1Q9NWZ5 548 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 RAB26Q9ULW5 256 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 RTL9Q8NET4 1388 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 FLT1P17948 1338 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GOLGA8QA0A0J9YX86 632 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GOLGA8OA6NCC3 632 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GOLGA8NF8WBI6 632 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 H3BNX3 289 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 GOLGA8RI6L899 631 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 FCHO1O14526 889 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ZBTB43O43298 467 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 KLRC4O43908 158 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ATE1O95260 518 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 PLEKHA8P1O95397 391 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 KRT13P13646 458 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CCNE1P24864 410 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 HADHAP40939 763 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MLLT6P55198 1093 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ARID5AQ03989 594 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MTMR2Q13614 643 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CCNIQ14094 377 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MOGQ16653 247 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 IGSF11Q5DX21 431 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 EFHC1Q5JVL4 640 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 EEPD1Q7L9B9 569 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 OTOP3Q7RTS5 596 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 DCP2Q8IU60 420 aaKnown RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 PSD4Q8NDX1 1056 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TRUB1Q8WWH5 349 aaKnown RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ZNF75CPQ92670 426 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TANKQ92844 425 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 ART4Q93070 314 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 FEM1CQ96JP0 617 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TTC25Q96NG3 672 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 DBNDD2Q9BQY9 259 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CLPBQ9H078 707 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TRIT1Q9H3H1 467 aaKnown RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 MOV10Q9HCE1 1003 aaKnown RBP9.83□□□□□ -0.84
CLIP1-214ENST00000540539 CD209Q9NNX6 404 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TMCC3Q9ULS5 477 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 SQORQ9Y6N5 450 aa9.83□□□□□ -0.84
CLIP1-214ENST00000540539 TAF4O00268 1085 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 CDH16O75309 829 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 TCEA3O75764 348 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 RAG1P15918 1043 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 ZAP70P43403 619 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 POLD2P49005 469 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 CACNB3P54284 484 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 GJA9P57773 515 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 CLUL1Q15846 466 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 TNNI3KQ59H18 835 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 EARS2Q5JPH6 523 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 C10orf76Q5T2E6 689 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 PLEKHA7Q6IQ23 1121 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 ZCCHC8Q6NZY4 707 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 ZBTB46Q86UZ6 589 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 IGFN1Q86VF2 1251 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 SRBD1Q8N5C6 995 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 METTL2AQ96IZ6 378 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 ALPK1Q96QP1 1244 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 TDRD1Q9BXT4 1180 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 MTMR12Q9C0I1 747 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 NMUR2Q9GZQ4 415 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 HIPK3Q9H422 1215 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 FPGT-TNNI3KV9GXZ4 949 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 A0A0B4J203 849 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 C2orf71A6NGG8 1288 aa9.82□□□□□ -0.84
CLIP1-214ENST00000540539 MSI1O43347 362 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 ENO1P06733 434 aaKnown RBP9.82□□□□□ -0.84
CLIP1-214ENST00000540539 GSTM1P09488 218 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms