RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 HECTD3Q5T447 861 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 KRT39Q6A163 491 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 FSTL4Q6MZW2 842 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 PAQR9Q6ZVX9 377 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 FUKQ8N0W3 1084 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CRYBG2Q8N1P7 616 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 SLC2A14Q8TDB8 520 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CD101Q93033 1021 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CYFIP2Q96F07 1278 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 NT5C1AQ9BXI3 368 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 NACA2Q9H009 215 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CYP3A43Q9HB55 503 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 FBRSL1Q9HCM7 1045 aaKnown RBP9.55□□□□□ -0.88
LMO3-222ENST00000540445 TMEM8AQ9HCN3 771 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 C2orf42Q9NWW7 574 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 DLL3Q9NYJ7 618 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 SLC8A2Q9UPR5 921 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 CPQQ9Y646 472 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 THADAQ6YHU6 1953 aa9.55□□□□□ -0.88
LMO3-222ENST00000540445 SDK1Q7Z5N4 2213 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SLC9A3R1O14745 358 aaPredicted RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 SCAMP3O14828 347 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 STX10O60499 249 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 ABCB7O75027 752 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 RNF40O75150 1001 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 OAS1P00973 400 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 FAM200BP0CF97 657 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 TCF3P15923 654 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 HOXA6P31267 233 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 HOXC13P31276 330 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 GTF2H1P32780 548 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 ASPAP45381 313 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SLC5A3P53794 718 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SLC7A9P82251 487 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 ZXDBP98169 803 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 FKBP3Q00688 224 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 ENPEPQ07075 957 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 STIM1Q13586 685 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 DCAF17Q5H9S7 520 aaPredicted RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 ANKRD40Q6AI12 368 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 FILIP1Q7Z7B0 1213 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 LONP2Q86WA8 852 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 DDX42Q86XP3 938 aaKnown RBP eCLIP9.54□□□□□ -0.88
LMO3-222ENST00000540445 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 FBXL13Q8NEE6 735 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 ENGASEQ8NFI3 743 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 OVCA2Q8WZ82 227 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 JAKMIP2Q96AA8 810 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 HEXIM2Q96MH2 286 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SMOQ99835 787 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 FBXO44Q9H4M3 255 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 APOBEC3GQ9HC16 384 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
LMO3-222ENST00000540445 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 CFAP97Q9P2B7 532 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 SH3BP1Q9Y3L3 701 aa9.54□□□□□ -0.88
LMO3-222ENST00000540445 PLXND1Q9Y4D7 1925 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 TNFRSF10BO14763 440 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 COCHO43405 550 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 HRO43593 1189 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 CNR2P34972 360 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 PXNP49023 591 aaPredicted RBP9.53□□□□□ -0.88
LMO3-222ENST00000540445 MXI1P50539 228 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 ZCWPW2Q504Y3 356 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 NAIF1Q69YI7 327 aaPredicted RBP9.53□□□□□ -0.88
LMO3-222ENST00000540445 CEP68Q76N32 757 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 GPR161Q8N6U8 529 aaKnown RBP9.53□□□□□ -0.88
LMO3-222ENST00000540445 RPLP0P6Q8NHW5 317 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 TWNKQ96RR1 684 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 HNRNPABQ99729 332 aaKnown RBP9.53□□□□□ -0.88
LMO3-222ENST00000540445 GTPBP4Q9BZE4 634 aaKnown RBP9.53□□□□□ -0.88
LMO3-222ENST00000540445 NIF3L1Q9GZT8 377 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 CSNK1G1Q9HCP0 422 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 PARD6AQ9NPB6 346 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 GMIPQ9P107 970 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
LMO3-222ENST00000540445 TRIM49BA6NDI0 452 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 PSMA7O14818 248 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 CILPO75339 1184 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 OLFM2O95897 454 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 CCDC192P0DO97 292 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 IRF1P10914 325 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 ACO1P21399 889 aaKnown RBP9.52□□□□□ -0.89
LMO3-222ENST00000540445 ATP5C1P36542 298 aaKnown RBP9.52□□□□□ -0.89
LMO3-222ENST00000540445 PMS1P54277 932 aaKnown RBP9.52□□□□□ -0.89
LMO3-222ENST00000540445 SEC13P55735 322 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 INCA1Q0VD86 236 aa9.52□□□□□ -0.89
LMO3-222ENST00000540445 SRSF5Q13243 272 aaKnown RBP9.52□□□□□ -0.89
LMO3-222ENST00000540445 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
LMO3-222ENST00000540445 DHCR24Q15392 516 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms