RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 ACAP3Q96P50 834 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 MECRQ9BV79 373 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 ZNF518BQ9C0D4 1074 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 ZWILCHQ9H900 591 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 RAVER2Q9HCJ3 691 aaKnown RBP11.69□□□□□ -0.54
CPT1A-206ENST00000540367 PNPLA8Q9NP80 782 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 SIRPGQ9P1W8 387 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 PLLPQ9Y342 182 aa11.69□□□□□ -0.54
CPT1A-206ENST00000540367 RNASEH1O60930 286 aaKnown RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 LRCH4O75427 683 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 USP1O94782 785 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 STBD1O95210 358 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 BAG2O95816 211 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 KDELR1P24390 212 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 PSMA2P25787 234 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 IL1R2P27930 398 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 NCOA4Q13772 614 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 AAGABQ6PD74 315 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 MARK2Q7KZI7 788 aaKnown RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.68□□□□□ -0.545e-8■■■■■ 35.9
CPT1A-206ENST00000540367 B4GALNT2Q8NHY0 566 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 HAPLN2Q9GZV7 340 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ZCWPW1Q9H0M4 648 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 POLR3FQ9H1D9 316 aaPredicted RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 SIP14410 1827 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 APOC4-APOC2K7ER74 178 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 STAM2O75886 525 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 KRT37O76014 449 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ZBTB7AO95365 584 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 APOC2P02655 101 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 C1QAP02745 245 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 WEE2P0C1S8 567 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 CDH5P33151 784 aaPredicted RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 CCNFP41002 786 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ERFP50548 548 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 AQP5P55064 265 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 EIF3EP60228 445 aaKnown RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 KCNT1Q5JUK3 1230 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 CYP4A22Q5TCH4 519 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 CES4AQ5XG92 561 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 GPAT2Q6NUI2 795 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 RAPH1Q70E73 1250 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ST13P4Q8IZP2 240 aaPredicted RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ARFGAP1Q8N6T3 406 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 OR5B17Q8NGF7 314 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 RAB3IL1Q8TBN0 382 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 MKS1Q9NXB0 559 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 MAP3K20Q9NYL2 800 aaKnown RBP11.68□□□□□ -0.54
CPT1A-206ENST00000540367 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 ZNF180Q9UJW8 692 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 TTLL3Q9Y4R7 772 aa11.68□□□□□ -0.54
CPT1A-206ENST00000540367 TESPA1A2RU30 521 aaPredicted RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 PDLIM1O00151 329 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 MCF2LO15068 1137 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 SERPINA6P08185 405 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 SNRPAP09012 282 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 MRPS5P82675 430 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 HADHQ16836 314 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CRLF3Q8IUI8 442 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 WDTC1Q8N5D0 677 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 OR6Y1Q8NGX8 325 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 APBB2Q92870 758 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 WNK4Q96J92 1243 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 EBF3Q9H4W6 596 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 SOX13Q9UN79 622 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 HBS1LQ9Y450 684 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 COMMD3-BMI1R4GMX3 469 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CNTNAP2Q9UHC6 1331 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CCDC195A0A1B0GUA6 201 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 PRR5-ARHGAP8B1AHC4 643 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 DKC1O60832 514 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 SNNO75324 88 aaPredicted RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 LDHAP00338 332 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 PIGRP01833 764 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CD48P09326 243 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 RBP3P10745 1247 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 PIM1P11309 404 aaPredicted RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 EIF4BP23588 611 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 RFC1P35251 1148 aaPredicted RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CPOXP36551 454 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 ALDH18A1P54886 795 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
CPT1A-206ENST00000540367 ARHGAP8P85298 464 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 CBLBQ13191 982 aa11.67□□□□□ -0.54
CPT1A-206ENST00000540367 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms