RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 C2orf71A6NGG8 1288 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 B4GALT3O60512 393 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 OR1G1P47890 313 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 MARCKSL1P49006 195 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 MRPS25P82663 173 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ZBTB6Q15916 424 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SGO2Q562F6 1265 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 DCUN1D2Q6PH85 259 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ALKAL1Q6UXT8 129 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ADHFE1Q8IWW8 467 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 GSPT2Q8IYD1 628 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 NIPA2Q8N8Q9 360 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SMRP1Q8NCR6 262 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 VN1R2Q8NFZ6 395 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 AUTS2Q8WXX7 1259 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 RUFY1Q96T51 708 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SMYD3Q9H7B4 428 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SNTG2Q9NY99 539 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 GIT1Q9Y2X7 761 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 NRP1O14786 923 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 TTI1O43156 1089 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 PNPLA4P41247 253 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SCNN1GP51170 649 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SNX16P57768 344 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 COPS2P61201 443 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ZP2Q05996 745 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 HLTFQ14527 1009 aaKnown RBP eCLIP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SYDE1Q6ZW31 735 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 RCOR2Q8IZ40 523 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 PRELID2Q8N945 189 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 EXD1Q8NHP7 514 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 FNIP1Q8TF40 1166 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 BCL7CQ8WUZ0 217 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SLCO2A1Q92959 643 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 C18orf8Q96DM3 657 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ERP44Q9BS26 406 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 APOL5Q9BWW9 433 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 NT5C1AQ9BXI3 368 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 C1QTNF1Q9BXJ1 281 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 SDCBP2Q9H190 292 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 LRRC19Q9H756 370 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 PRG3Q9Y2Y8 225 aaPredicted RBP12.56□□□□□ -0.4
CYB561A3-215ENST00000540317 ESYT3A0FGR9 886 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 KCNE1P15382 129 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 CYP3A5P20815 502 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 COILP38432 576 aaPredicted RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 HSPA9P38646 679 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 RAP1GAPP47736 663 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 CDH8P55286 799 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 MTMR3Q13615 1198 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 ACAP1Q15027 740 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 XKR4Q5GH76 650 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 SPDYCQ5MJ68 293 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 PPP1R15BQ5SWA1 713 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 DUPD1Q68J44 220 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 CCDC137Q6PK04 289 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 GRK7Q8WTQ7 553 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 RBM41Q96IZ5 413 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 HEXIM2Q96MH2 286 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 TMEM175Q9BSA9 504 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 ELOVL4Q9GZR5 314 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 ZBP1Q9H171 429 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 DDX56Q9NY93 547 aaKnown RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
CYB561A3-215ENST00000540317 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 GOLGA8KD6RF30 607 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 H3BQF6 201 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 CLASP2O75122 1294 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 RECQL4O94761 1208 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 MICAL2O94851 1124 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 RARAP10276 462 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 CTSAP10619 480 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 GABRB2P47870 512 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 LCLAT1Q6UWP7 414 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 TMEM184AQ6ZMB5 413 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 ADAT2Q7Z6V5 191 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
CYB561A3-215ENST00000540317 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms