RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 KIF11P52732 1056 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 ZNF132P52740 706 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 MYL5Q02045 173 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 BST2Q10589 180 aaKnown RBP14.13□□□□□ -0.15
CCDC130-202ENST00000540216 MTF1Q14872 753 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 PDGFRLQ15198 375 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 GOLGA7BQ2TAP0 167 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 MIIPQ5JXC2 388 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 HECTD3Q5T447 861 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 CDKAL1Q5VV42 579 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 LCLAT1Q6UWP7 414 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 ZNF852Q6ZMS4 543 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 TTC30AQ86WT1 665 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 TMEM105Q8N8V8 129 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 RBBP8NLQ8NC74 664 aaPredicted RBP14.13□□□□□ -0.15
CCDC130-202ENST00000540216 PJA1Q8NG27 643 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 KREMEN1Q96MU8 473 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 CYP2S1Q96SQ9 504 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 CRACR2AQ9BSW2 395 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 UBE2TQ9NPD8 197 aaPredicted RBP14.13□□□□□ -0.15
CCDC130-202ENST00000540216 SAMSN1Q9NSI8 373 aaKnown RBP14.13□□□□□ -0.15
CCDC130-202ENST00000540216 TSPAN16Q9UKR8 245 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 SIT1Q9Y3P8 196 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 USP3Q9Y6I4 520 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 PIAS3Q9Y6X2 628 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 TICRRQ7Z2Z1 1910 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
CCDC130-202ENST00000540216 MYO16Q9Y6X6 1858 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 XPO1O14980 1071 aaKnown RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 TPM2P07951 284 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 PON1P27169 355 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 MAGEA9P43362 315 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 CNGA2Q16280 664 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 MEA1Q16626 185 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 KLHL40Q2TBA0 621 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 ITPRIPL2Q3MIP1 535 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 IER5LQ5T953 404 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 C11orf57Q6ZUT1 292 aaPredicted RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 TADA2BQ86TJ2 420 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 RALGPS2Q86X27 583 aaPredicted RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 ARHGAP18Q8N392 663 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 FAM83CQ9BQN1 747 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 LTB4R2Q9NPC1 389 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 CYLDQ9NQC7 956 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 GKN1Q9NS71 199 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 CHORDC1Q9UHD1 332 aaPredicted RBP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC130-202ENST00000540216 F5P12259 2224 aa14.12□□□□□ -0.15
CCDC130-202ENST00000540216 NCAM2O15394 837 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 CYP26A1O43174 497 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 COCHO43405 550 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 PI15O43692 258 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 LETM1O95202 739 aaPredicted RBP14.11□□□□□ -0.15
CCDC130-202ENST00000540216 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
CCDC130-202ENST00000540216 KRT5P13647 590 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 SLC9A1P19634 815 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 PLA2G4AP47712 749 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 IFNAR2P48551 515 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 KPNA1P52294 538 aaPredicted RBP14.11□□□□□ -0.15
CCDC130-202ENST00000540216 TYRO3Q06418 890 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 PDE4CQ08493 712 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 UBXN2BQ14CS0 331 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 PKDCCQ504Y2 493 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 HSP90AA4PQ58FG1 418 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 KLHDC10Q6PID8 442 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 CCDC105Q8IYK2 499 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 OSCP1Q8WVF1 389 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 TFAP2BQ92481 460 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 SHC3Q92529 594 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 ATP2A3Q93084 1043 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 ZFYVE19Q96K21 471 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
CCDC130-202ENST00000540216 FOXQ1Q9C009 403 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 NACA2Q9H009 215 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 RNF38Q9H0F5 515 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 DUS2Q9NX74 493 aaKnown RBP14.11□□□□□ -0.15
CCDC130-202ENST00000540216 CLIC5Q9NZA1 410 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 CPQQ9Y646 472 aa14.11□□□□□ -0.15
CCDC130-202ENST00000540216 MIA3Q5JRA6 1907 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 SHISA7A6NL88 538 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 SPECC1L-ADORA2AF8WAN1 911 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 RNF225M0QZC1 329 aaPredicted RBP14.1□□□□□ -0.15
CCDC130-202ENST00000540216 LEFTY2O00292 366 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 PES1O00541 588 aaKnown RBP14.1□□□□□ -0.15
CCDC130-202ENST00000540216 SLC9A3R1O14745 358 aaPredicted RBP14.1□□□□□ -0.15
CCDC130-202ENST00000540216 MED7O43513 233 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
CCDC130-202ENST00000540216 TLR5O60602 858 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 RALAP11233 206 aa14.1□□□□□ -0.15
CCDC130-202ENST00000540216 BRD2P25440 801 aaKnown RBP14.1□□□□□ -0.15
CCDC130-202ENST00000540216 CTHP32929 405 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms