RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SPATA7Q9P0W8 599 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PCYOX1Q9UHG3 505 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 TGFB3P10600 412 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 KRT4P19013 534 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 CHN2P52757 468 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PDK3Q15120 406 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 CYTH1Q15438 398 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 IYDQ6PHW0 289 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ACAD11Q709F0 780 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SAMD3Q8N6K7 520 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 FAM193BQ96PV7 902 aaPredicted RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 HEMGNQ9BXL5 484 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 GANQ9H2C0 597 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 CYP4F11Q9HBI6 524 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ARL8BQ9NVJ2 186 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 GRHL1Q9NZI5 618 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 TDRKHQ9Y2W6 561 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 ACTL7BQ9Y614 415 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 EFCAB14O75071 495 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 PARNO95453 639 aaKnown RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 ZNF286BP0CG31 522 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 KRT5P13647 590 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SMARCA1P28370 1054 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 CASP5P51878 434 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 MGAT5Q09328 741 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 RASA2Q15283 850 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SHHQ15465 462 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 KRT80Q6KB66 452 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 CATSPER3Q86XQ3 398 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ATP11CQ8NB49 1132 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 FAM136AQ96C01 138 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 SLC7A6OSQ96CW6 309 aaPredicted RBP9.04□□□□□ -0.96
DDB1-217ENST00000540166 THAP11Q96EK4 314 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 IFT122Q9HBG6 1241 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 NINJ2Q9NZG7 142 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 ARMCX1Q9P291 453 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
DDB1-217ENST00000540166 MCF2LO15068 1137 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 STAM2O75886 525 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TIMP1P01033 207 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 KITP10721 976 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 EIF4BP23588 611 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 TMPRSS15P98073 1019 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TBL3Q12788 808 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 LHX8Q68G74 356 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 OTOAQ7RTW8 1153 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TRIM50Q86XT4 487 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 DDI1Q8WTU0 396 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 HAS1Q92839 578 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 LRCH3Q96II8 777 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PDCD2LQ9BRP1 358 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TRIM56Q9BRZ2 755 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 TMEM120AQ9BXJ8 343 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PARVGQ9HBI0 331 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 FAM50BQ9Y247 325 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 DTNAQ9Y4J8 743 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 FCHO1O14526 889 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 USP1O94782 785 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZNF865P0CJ78 1059 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 MYL2P10916 166 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PHEXP78562 749 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 GIT2Q14161 759 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 SYDE1Q6ZW31 735 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 CENPUQ71F23 418 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 CROCCP3Q8IVE0 287 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 CTAGE3PQ8IX95 158 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ALG3Q92685 438 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZNF577Q9BSK1 485 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 DRC3Q9H069 523 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 WWP1Q9H0M0 922 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PXMP2Q9NR77 195 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 Q9Y3F1 56 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 SMAPO00193 183 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 P4HA2O15460 535 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 STAG3L1P0CL83 205 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 GAP43P17677 238 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 PAX3P23760 479 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 RPA3P35244 121 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 ALDH18A1P54886 795 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 WDR72Q3MJ13 1102 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 XRRA1Q6P2D8 792 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 Q7L0L9 218 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZBED8Q8IZ13 594 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZNF564Q8TBZ8 553 aaPredicted RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZNF398Q8TD17 642 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 GDPD5Q8WTR4 605 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 KRT35Q92764 455 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 CCDC127Q96BQ5 260 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 ZFRQ96KR1 1074 aaKnown RBP9.03□□□□□ -0.96
DDB1-217ENST00000540166 CNBD2Q96M20 576 aa9.03□□□□□ -0.96
DDB1-217ENST00000540166 TOX2Q96NM4 488 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms