RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 CHD7Q9P2D1 2997 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 SYNJ2BP-COX16A0A087WUM0 186 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 PGRMC1O00264 195 aaKnown RBP10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 GJB5O95377 273 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 MIPP30301 263 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 MAN1A1P33908 653 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 ELAVL2Q12926 359 aaKnown RBP10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 USP41Q3LFD5 358 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 SYPL2Q5VXT5 272 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 SCYL2Q6P3W7 929 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 SLC26A9Q7LBE3 791 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 CCDC50Q8IVM0 306 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 DEFB106AQ8N104 65 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 SLC39A11Q8N1S5 342 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 COLGALT1Q8NBJ5 622 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 TMEM169Q96HH4 297 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 CNPY3Q9BT09 278 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 COX16Q9P0S2 106 aa10.85□□□□□ -0.67
PABPC1P4-201ENST00000539977 CHD9Q3L8U1 2897 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 MICAL3Q7RTP6 2002 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 KRIT1O00522 736 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 CES2O00748 559 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 RNF8O76064 485 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 VNN2O95498 520 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ZBED1O96006 694 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 SDC4P31431 198 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 OR1D2P34982 312 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 PGFP49763 221 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 SLC5A3P53794 718 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 TERF1P54274 439 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 RAB41Q5JT25 222 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ANKS3Q6ZW76 656 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ZDHHC17Q8IUH5 632 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 RASGEF1CQ8N431 466 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 NIPA2Q8N8Q9 360 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 FBXO22Q8NEZ5 403 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ACTRT1Q8TDG2 376 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 FNIP1Q8TF40 1166 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 FAM172AQ8WUF8 416 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 RAPGEF5Q92565 580 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 HSPH1Q92598 858 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 EDEM1Q92611 657 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 PEBP4Q96S96 227 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 KRT12Q99456 494 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 ASNSD1Q9NWL6 643 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 GPATCH2LQ9NWQ4 482 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 CALCOCO1Q9P1Z2 691 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 NAALADL1Q9UQQ1 740 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 PCDHB5Q9Y5E4 795 aa10.84□□□□□ -0.67
PABPC1P4-201ENST00000539977 OR6C75A6NL08 312 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 PSTPIP1O43586 416 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 EFEMP2O95967 443 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 KRT1P04264 644 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 FYNP06241 537 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 KRT10P13645 584 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 DAOAP59103 153 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 DUSP4Q13115 394 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SMC1AQ14683 1233 aaKnown RBP10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 PSMD5Q16401 504 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 EFHC1Q5JVL4 640 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 COL13A1Q5TAT6 717 aaPredicted RBP10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 KAZNQ674X7 775 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SPRED2Q7Z698 418 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 HDAC7Q8WUI4 952 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 TBCBQ99426 244 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SEPT5Q99719 369 aaPredicted RBP10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 FAM118BQ9BPY3 351 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 MAGEB5Q9BZ81 275 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 CHST7Q9NS84 486 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SPG21Q9NZD8 308 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 RNF14Q9UBS8 474 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 USP18Q9UMW8 372 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SLC4A7Q9Y6M7 1214 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 WDR27A2RRH5 827 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 LRRD1A4D1F6 860 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 MTMR11A4FU01 709 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 H7C4K7 107 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 ZMYND10O75800 440 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 SOD2P04179 222 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 CD48P09326 243 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 RALAP11233 206 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 ATP2A2P16615 1042 aaKnown RBP10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 LAG3P18627 525 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 CA8P35219 290 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 HDAC4P56524 1084 aa10.83□□□□□ -0.68
PABPC1P4-201ENST00000539977 USP46P62068 366 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms