RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SPARCL1Q14515 664 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 KPNB1Q14974 876 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 TEAD4Q15561 434 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 CCDC142Q17RM4 750 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 TTC27Q6P3X3 843 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 NSMFQ6X4W1 530 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 VSIG1Q86XK7 387 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 CATSPER3Q86XQ3 398 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ECHDC2Q86YB7 292 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 SNIP1Q8TAD8 396 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ETNPPLQ8TBG4 499 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 DNAJC9Q8WXX5 260 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 EDEM1Q92611 657 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 UTP4Q969X6 686 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 FAM136AQ96C01 138 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 C18orf8Q96DM3 657 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ARHGEF26Q96DR7 871 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 NECAB3Q96P71 396 aaPredicted RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 FGFBP2Q9BYJ0 223 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 GPR88Q9GZN0 384 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 INTS2Q9H0H0 1204 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 KCNH6Q9H252 994 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 CDC42EP4Q9H3Q1 356 aaKnown RBP8.04□□□□□ -1.12
CCDC60-204ENST00000539847 TUFT1Q9NNX1 390 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 AAASQ9NRG9 546 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 PDP2Q9P2J9 529 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 RAPGEFL1Q9UHV5 662 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 GTF3C4Q9UKN8 822 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 NAALADL1Q9UQQ1 740 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 INPP5FQ9Y2H2 1132 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 FRMD4BQ9Y2L6 1034 aa8.04□□□□□ -1.12
CCDC60-204ENST00000539847 MYH7BA7E2Y1 1941 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 DPPA5A6NC42 116 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 MAGEA13PA6NCF6 341 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 EPOPA6NHQ4 379 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 TP73O15350 636 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 EXOC3O60645 756 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 LPXNO60711 386 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SMIM24O75264 130 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 TBCAO75347 108 aaKnown RBP8.03□□□□□ -1.12
CCDC60-204ENST00000539847 MED24O75448 989 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 IL1BP01584 269 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CXCL10P02778 98 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 MYL3P08590 195 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CTSHP09668 335 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SPATA31C1P0DKV0 1188 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 PYGMP11217 842 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 COMTP21964 271 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 IFNAR2P48551 515 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 RAD23BP54727 409 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 MXRA7P84157 204 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 BIRC2Q13490 618 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 MPP2Q14168 576 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 KRT72Q14CN4 511 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CCNG2Q16589 344 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 PDK4Q16654 411 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SYDE2Q5VT97 1194 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CGB2Q6NT52 195 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 PPP1R2P3Q6NXS1 205 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 KCTD1Q719H9 257 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 EEPD1Q7L9B9 569 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 DEFB128Q7Z7B8 93 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SFR1Q86XK3 245 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 ETFBKMTQ8IXQ9 262 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 ZDHHC14Q8IZN3 488 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CCDC89Q8N998 374 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 DRAXINQ8NBI3 349 aaPredicted RBP8.03□□□□□ -1.12
CCDC60-204ENST00000539847 FAM13CQ8NE31 585 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 OR6J1Q8NGC5 347 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 LMO3Q8TAP4 145 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 TEKT4Q8WW24 435 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 ARNTL2Q8WYA1 636 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 NCSTNQ92542 709 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SLC7A6OSQ96CW6 309 aaPredicted RBP8.03□□□□□ -1.12
CCDC60-204ENST00000539847 IFT43Q96FT9 208 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 NUDCD1Q96RS6 583 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 REEP2Q9BRK0 252 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 STRA6Q9BX79 667 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 TBC1D10AQ9BXI6 508 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 THAP2Q9H0W7 228 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 EPHX3Q9H6B9 360 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 VAT1LQ9HCJ6 419 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 KCNK9Q9NPC2 374 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 AVENQ9NQS1 362 aaPredicted RBP8.03□□□□□ -1.12
CCDC60-204ENST00000539847 DDX43Q9NXZ2 648 aaKnown RBP8.03□□□□□ -1.12
CCDC60-204ENST00000539847 RGL1Q9NZL6 768 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 IL1RAPL1Q9NZN1 696 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 TBC1D7Q9P0N9 293 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 WDR35Q9P2L0 1181 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SLC24A2Q9UI40 661 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 SCOCQ9UIL1 159 aa8.03□□□□□ -1.12
CCDC60-204ENST00000539847 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.02□□□□□ -1.13
CCDC60-204ENST00000539847 SIGLEC16A6NMB1 481 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 A8MXQ7 604 aa8.02□□□□□ -1.13
CCDC60-204ENST00000539847 PRR33A8MZF0 331 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms