RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CNPY4Q8N129 248 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 RIBC1Q8N443 379 aaPredicted RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 EMC1Q8N766 993 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 C12orf29Q8N999 325 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 RSAD2Q8WXG1 361 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 RSPH1Q8WYR4 309 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 GLT1D1Q96MS3 346 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 FERMT1Q9BQL6 677 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 DUSP16Q9BY84 665 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 FAM49BQ9NUQ9 324 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 RRN3Q9NYV6 651 aa10.64□□□□□ -0.71
SPARC-209ENST00000539687 R3HDM2Q9Y2K5 976 aaKnown RBP10.64□□□□□ -0.71
SPARC-209ENST00000539687 A0A0U1RQF3 1178 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 C3orf70A6NLC5 250 aaPredicted RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 SGK1O00141 431 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 PPEF2O14830 753 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 RGS16O15492 202 aaPredicted RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 PAPSS1O43252 624 aaPredicted RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 DAB1O75553 588 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 CHRNA1P02708 482 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 FAM200BP0CF97 657 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 KRT10P13645 584 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 TSHRP16473 764 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 NPR3P17342 541 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 PTPN1P18031 435 aaKnown RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 IVDP26440 423 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 FLT3P36888 993 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 MLH1P40692 756 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 ARSEP51690 589 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 ZNF135P52742 658 aaPredicted RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 CDH6P55285 790 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 ITGA7Q13683 1181 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 CCDC14Q49A88 953 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 DAB2IPQ5VWQ8 1189 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 MFSD5Q6N075 450 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 HIBCHQ6NVY1 386 aaPredicted RBP10.63□□□□□ -0.71
SPARC-209ENST00000539687 PMF1Q6P1K2 205 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 CENPUQ71F23 418 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 RAET1EQ8TD07 263 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 SLC2A14Q8TDB8 520 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 FAM172AQ8WUF8 416 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 P3H4Q92791 437 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 ARL8AQ96BM9 186 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 CFAP57Q96MR6 1250 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 SERPINB12Q96P63 405 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 CALN1Q9BXU9 219 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPARC-209ENST00000539687 KLHL11Q9NVR0 708 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPARC-209ENST00000539687 DNPEPQ9ULA0 475 aa10.63□□□□□ -0.71
SPARC-209ENST00000539687 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 APOL1O14791 398 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 SPTLC1O15269 473 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 INPPL1O15357 1258 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 TCEA3O75764 348 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 TTC4O95801 387 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 EOMESO95936 686 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 CTSHP09668 335 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 COL6A1P12109 1028 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 IL1R2P27930 398 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ADORA2BP29275 332 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 MATKP42679 507 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 NR2C2P49116 596 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 RGS7P49802 495 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 PPP2R2AP63151 447 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 IRX5P78411 483 aaPredicted RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 OTUD4Q01804 1114 aaKnown RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 ROR1Q01973 937 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 SOX4Q06945 474 aaPredicted RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 NR1H3Q13133 447 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 XRCC4Q13426 336 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 TUSC3Q13454 348 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 DSC3Q14574 896 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 STAT4Q14765 748 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 NOMO1Q15155 1222 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 SMTNL2Q2TAL5 461 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 P3H1Q32P28 736 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ATP13A4Q4VNC1 1196 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ERMARDQ5T6L9 678 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 PPIL6Q8IXY8 311 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ARFGAP1Q8N6T3 406 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ACTL9Q8TC94 416 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 HSPH1Q92598 858 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 CENPIQ92674 756 aaPredicted RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 SENP8Q96LD8 212 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 GAD1Q99259 594 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 MED10Q9BTT4 135 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 DDX23Q9BUQ8 820 aaKnown RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 FTHL17Q9BXU8 183 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 ARHGAP39Q9C0H5 1083 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms