RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PCSK1NQ9UHG2 260 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 CPSF3Q9UKF6 684 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 PLLPQ9Y342 182 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ENO4A6NNW6 628 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 B2RBV5 119 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 KRT37O76014 449 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 RNF8O76064 485 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 APBA3O96018 575 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 BACE1P56817 501 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 NOMO1Q15155 1222 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TAF5Q15542 800 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ZNF699Q32M78 642 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ANGEL2Q5VTE6 544 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 ATG16L1Q676U5 607 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TTC7BQ86TV6 843 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 EMC1Q8N766 993 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 MCRS1Q96EZ8 462 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TSC22D3Q99576 134 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ACO2Q99798 780 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 SH3GL3Q99963 347 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TCHPQ9BT92 498 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 IQCGQ9H095 443 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 VPS33BQ9H267 617 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ZNF277Q9NRM2 450 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 METTL5Q9NRN9 209 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 ZNF214Q9UL59 606 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDH13-204ENST00000539548 PHIPQ8WWQ0 1821 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 C2orf71A6NGG8 1288 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 E5RJQ4 531 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 I3L4J1 428 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 MAP3K7O43318 606 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 SMIM24O75264 130 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 MAFO75444 373 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 UPP2O95045 317 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ERBB2P04626 1255 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ATP5BP06576 529 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 GSTA2P09210 222 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 CD19P15391 556 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 GABRB2P47870 512 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 THOC5Q13769 683 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 TFDP2Q14188 446 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 RCN2Q14257 317 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 HSF5Q4G112 596 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 FAM47CQ5HY64 1035 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 SCARA5Q6ZMJ2 495 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 CDHR3Q6ZTQ4 885 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 NET1Q7Z628 596 aaPredicted RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 PRPF39Q86UA1 669 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 SMC1BQ8NDV3 1235 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 RAB3IL1Q8TBN0 382 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 UCMAQ8WVF2 138 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TEKT4Q8WW24 435 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 PRPF31Q8WWY3 499 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 HSPH1Q92598 858 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 FAF2Q96CS3 445 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 CPXM1Q96SM3 734 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 CALN1Q9BXU9 219 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 USP29Q9HBJ7 922 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 MYOZ2Q9NPC6 264 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ASNSD1Q9NWL6 643 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 MKS1Q9NXB0 559 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 DDX43Q9NXZ2 648 aaKnown RBP10.07□□□□□ -0.8
CDH13-204ENST00000539548 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 SCOCQ9UIL1 159 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 USP18Q9UMW8 372 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 TTLL3Q9Y4R7 772 aa10.07□□□□□ -0.8
CDH13-204ENST00000539548 ANK1P16157 1881 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 LCTP09848 1927 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 EME2A4GXA9 379 aaPredicted RBP10.06□□□□□ -0.8
CDH13-204ENST00000539548 MAGEA13PA6NCF6 341 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 AVILO75366 819 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 TNNC2P02585 160 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 HOXC6P09630 235 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 PRKCHP24723 683 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 CCNFP41002 786 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 NRLP54845 237 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 YWHAZP63104 245 aaKnown RBP10.06□□□□□ -0.8
CDH13-204ENST00000539548 TFAMQ00059 246 aaKnown RBP10.06□□□□□ -0.8
CDH13-204ENST00000539548 TMEM132BQ14DG7 1078 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 STXBP2Q15833 593 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 NPNTQ6UXI9 565 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 ALYREFQ86V81 257 aaKnown RBP10.06□□□□□ -0.8
CDH13-204ENST00000539548 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 PPM1NQ8N819 430 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 DTX3LQ8TDB6 740 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 GATA6Q92908 595 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 E2F7Q96AV8 911 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 RTP4Q96DX8 246 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 IFT43Q96FT9 208 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 CFAP36Q96G28 342 aa10.06□□□□□ -0.8
CDH13-204ENST00000539548 BCO2Q9BYV7 579 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms