RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 DRD1P21728 446 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 GTF2H1P32780 548 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HECTD3Q5T447 861 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 KRT39Q6A163 491 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 LONP2Q86WA8 852 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 EZH1Q92800 747 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SMARCE1Q969G3 411 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 EXOC4Q96A65 974 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 JAKMIP2Q96AA8 810 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 GSDMAQ96QA5 445 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TSG101Q99816 390 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 NT5C1AQ9BXI3 368 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 IL37Q9NZH6 218 aa20.19■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HRO43593 1189 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CILPO75339 1184 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FAM200BP0CF97 657 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PXNP49023 591 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PGFP49763 221 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 MXI1P50539 228 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 PMS1P54277 932 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SIM2Q14190 667 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 WHAMMQ8TF30 809 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CCSER2Q9H7U1 834 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CSNK1G1Q9HCP0 422 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
TNFRSF1A-212ENST00000539372 WDR87Q6ZQQ6 2873 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TRIM49BA6NDI0 452 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ATG13O75143 517 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CYP17A1P05093 508 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TRIM21P19474 475 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ID4P47928 161 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ZNF394Q53GI3 561 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 DCAF17Q5H9S7 520 aaPredicted RBP20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ISM2Q6H9L7 571 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CLEC20AQ6ZU45 233 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 GPRIN1Q7Z2K8 1008 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 RPLP0P6Q8NHW5 317 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SPATA20Q8TB22 786 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CYFIP2Q96F07 1278 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HNRNPABQ99729 332 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 COMMD8Q9NX08 183 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HOOK1Q9UJC3 728 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 GMEB2Q9UKD1 530 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SLC8A2Q9UPR5 921 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FRYLO94915 3013 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ZNF292O60281 2723 aa20.17■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FAM92AA1XBS5 289 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ZDHHC11BP0C7U3 371 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 OPRD1P41143 372 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 MCCD1P59942 119 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 GAB4Q2WGN9 574 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FBXO43Q4G163 708 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 COBLL1Q53SF7 1204 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TCERG1LQ5VWI1 586 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 DDX42Q86XP3 938 aaKnown RBP eCLIP20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ADGRG2Q8IZP9 1017 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FBXL13Q8NEE6 735 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ZFRQ96KR1 1074 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TIGD1Q96MW7 591 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 NACA2Q9H009 215 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FBXO44Q9H4M3 255 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 RAB20Q9NX57 234 aa20.16■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ATG2BQ96BY7 2078 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HHLA1C9JL84 531 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SLC9A3R1O14745 358 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CYP26A1O43174 497 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 STX10O60499 249 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HOXA6P31267 233 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TUBP50607 506 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SEC13P55735 322 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 FKBP3Q00688 224 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 DHCR24Q15392 516 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 WDR5BQ86VZ2 330 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 TATDN2Q93075 761 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 RMDN1Q96DB5 314 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HEXIM2Q96MH2 286 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 HHIPQ96QV1 700 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 ARID3AQ99856 593 aa20.15■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SPTBN4Q9H254 2564 aa20.14■□□□□ 0.82
TNFRSF1A-212ENST00000539372 SLC16A3O15427 465 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 IRF1P10914 325 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 ACO1P21399 889 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 CNR2P34972 360 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 PPP1R26Q5T8A7 1209 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 LAIR1Q6GTX8 287 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 RHBDF2Q6PJF5 856 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 CEP68Q76N32 757 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 ZC3H3Q8IXZ2 948 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 KIAA1958Q8N8K9 716 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 WBP2Q969T9 261 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 TLR8Q9NR97 1041 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 CISHQ9NSE2 258 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 MAN1B1Q9UKM7 699 aa20.14■□□□□ 0.81
TNFRSF1A-212ENST00000539372 SH3BP1Q9Y3L3 701 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms