RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CYP3A43Q9HB55 503 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 TMEM8AQ9HCN3 771 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 RMND1Q9NWS8 449 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 COMMD8Q9NX08 183 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 IL37Q9NZH6 218 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 GMIPQ9P107 970 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 CFAP97Q9P2B7 532 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 SLC8A2Q9UPR5 921 aa23.53■■□□□ 1.36
SCARB1-206ENST00000539320 MYH10P35580 1976 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 GOLGA6L4A6NEF3 574 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 CYP17A1P05093 508 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 TUBP50607 506 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 NUCB2P80303 420 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 HECTD3Q5T447 861 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 ERMP1Q7Z2K6 904 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 CCDC150Q8NCX0 1101 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 EZH1Q92800 747 aaPredicted RBP23.52■■□□□ 1.36
SCARB1-206ENST00000539320 ACDQ96AP0 544 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 TWNKQ96RR1 684 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 USP18Q9UMW8 372 aa23.52■■□□□ 1.36
SCARB1-206ENST00000539320 SDK1Q7Z5N4 2213 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 FRYLO94915 3013 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 DMXL1Q9Y485 3027 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 FAM92AA1XBS5 289 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 SCAMP3O14828 347 aaKnown RBP23.51■■□□□ 1.35
SCARB1-206ENST00000539320 COCHO43405 550 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 FAM200BP0CF97 657 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 ADORA2BP29275 332 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 GTF2H1P32780 548 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 FOXK2Q01167 660 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 SNX30Q5VWJ9 437 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 CEP68Q76N32 757 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.51■■□□□ 1.35
SCARB1-206ENST00000539320 C12orf29Q8N999 325 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 RPLP0P6Q8NHW5 317 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 NT5C1AQ9BXI3 368 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 CSNK1G1Q9HCP0 422 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 SPAG17Q6Q759 2223 aa23.51■■□□□ 1.35
SCARB1-206ENST00000539320 KIAA1549LQ6ZVL6 1849 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 MYO16Q9Y6X6 1858 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 CCDC163A0A0D9SF12 145 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 CETN3O15182 167 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 BEST1O76090 585 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 RETP07949 1114 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 ZDHHC11BP0C7U3 371 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 EPB41P11171 864 aaKnown RBP23.5■■□□□ 1.35
SCARB1-206ENST00000539320 OPRD1P41143 372 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 MXI1P50539 228 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 MAP3K7CLP57077 242 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 GAB4Q2WGN9 574 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 KRT39Q6A163 491 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 ZFRQ96KR1 1074 aaKnown RBP23.5■■□□□ 1.35
SCARB1-206ENST00000539320 PARD6AQ9NPB6 346 aa23.5■■□□□ 1.35
SCARB1-206ENST00000539320 CHORDC1Q9UHD1 332 aaPredicted RBP23.5■■□□□ 1.35
SCARB1-206ENST00000539320 CILPO75339 1184 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 CD58P19256 250 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 TGM1P22735 817 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 PXNP49023 591 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-206ENST00000539320 LMNB2Q03252 620 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 PUM1Q14671 1186 aaKnown RBP eCLIP23.49■■□□□ 1.353e-10■□□□□ 8.1
SCARB1-206ENST00000539320 DHCR24Q15392 516 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 CCDC26Q8TAB7 109 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 EEF2KMTQ96G04 330 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 HHIPQ96QV1 700 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 HNRNPABQ99729 332 aaKnown RBP23.49■■□□□ 1.35
SCARB1-206ENST00000539320 FBXO44Q9H4M3 255 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 CCSER2Q9H7U1 834 aa23.49■■□□□ 1.35
SCARB1-206ENST00000539320 POLR3BQ9NW08 1133 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-206ENST00000539320 E2F8A0AVK6 867 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 SMC2O95347 1197 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 ADH1CP00326 375 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 MCCD1P59942 119 aaPredicted RBP23.48■■□□□ 1.35
SCARB1-206ENST00000539320 COBLL1Q53SF7 1204 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 ZNF658Q5TYW1 1059 aaPredicted RBP23.48■■□□□ 1.35
SCARB1-206ENST00000539320 CLEC20AQ6ZU45 233 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 SYT13Q7L8C5 426 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 CAMKK1Q8N5S9 505 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 GSDMAQ96QA5 445 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 TSG101Q99816 390 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 DNAI2Q9GZS0 605 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 NACA2Q9H009 215 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 DLL3Q9NYJ7 618 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 TBC1D14Q9P2M4 693 aa23.48■■□□□ 1.35
SCARB1-206ENST00000539320 STX10O60499 249 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 TLR5O60602 858 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 LRP3O75074 770 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 PRCPP42785 496 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 SPEM2Q0P670 501 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 DMC1Q14565 340 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 RSPO4Q2I0M5 234 aaPredicted RBP23.47■■□□□ 1.35
SCARB1-206ENST00000539320 GPRIN1Q7Z2K8 1008 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 ENGASEQ8NFI3 743 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 WHAMMQ8TF30 809 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 GAB3Q8WWW8 586 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 JAKMIP2Q96AA8 810 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 CYFIP2Q96F07 1278 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 SH3BP1Q9Y3L3 701 aa23.47■■□□□ 1.35
SCARB1-206ENST00000539320 SLC16A3O15427 465 aaKnown RBP23.46■■□□□ 1.35
SCARB1-206ENST00000539320 RPP40O75818 363 aaKnown RBP23.46■■□□□ 1.35
SCARB1-206ENST00000539320 ADH5P11766 374 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms