RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 SCN1AP35498 2009 aa12.88□□□□□ -0.35
YBX3-207ENST00000539204 ANK1P16157 1881 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 BCAT2O15382 392 aaPredicted RBP12.87□□□□□ -0.35
YBX3-207ENST00000539204 EPB41L2O43491 1005 aaKnown RBP12.87□□□□□ -0.35
YBX3-207ENST00000539204 TULP3O75386 442 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 JUPP14923 745 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 GRIK1P39086 918 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 MAGEA11P43364 429 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 NCKAP1LP55160 1127 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 SEMG2Q02383 582 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 C6orf118Q5T5N4 469 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 DHRS13Q6UX07 377 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 DENND5BQ6ZUT9 1274 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 MIB1Q86YT6 1006 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 TMEM86AQ8N2M4 240 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 CADM4Q8NFZ8 388 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 BAP1Q92560 729 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 OTUB2Q96DC9 234 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 NXPE2Q96DL1 559 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 SPATA17Q96L03 361 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 MAGEC2Q9UBF1 373 aaPredicted RBP12.87□□□□□ -0.35
YBX3-207ENST00000539204 HCN2Q9UL51 889 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
YBX3-207ENST00000539204 MYOFQ9NZM1 2061 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 PIGRP01833 764 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 NCAM1P13591 858 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 SCP2P22307 547 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 LHX1P48742 406 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 PTPRNQ16849 979 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 ANO4Q32M45 955 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 TAF1BQ53T94 588 aaPredicted RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 TTC38Q5R3I4 469 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 EGFLAMQ63HQ2 1017 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 VSTM1Q6UX27 236 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 KIAA1324Q6UXG2 1013 aaKnown RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 C4orf50Q6ZRC1 276 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 TERB1Q8NA31 727 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 KCNN1Q92952 543 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 TOE1Q96GM8 510 aaKnown RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 ACOX2Q99424 681 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 GPR174Q9BXC1 333 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 CD93Q9NPY3 652 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 WSB2Q9NYS7 404 aaPredicted RBP12.86□□□□□ -0.35
YBX3-207ENST00000539204 KCND2Q9NZV8 630 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 L1RE1Q9UN81 338 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 BTBD3Q9Y2F9 522 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
YBX3-207ENST00000539204 TSC2P49815 1807 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 PTPRQQ9UMZ3 2332 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 ERVH48-1M5A8F1 160 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
YBX3-207ENST00000539204 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
YBX3-207ENST00000539204 OLFM2O95897 454 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 MBL2P11226 248 aaPredicted RBP12.85□□□□□ -0.35
YBX3-207ENST00000539204 ANXA13P27216 316 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 PCSK1P29120 753 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 HNF1BP35680 557 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 USP46P62068 366 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 BNC1Q01954 994 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 DCAF12L1Q5VU92 463 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
YBX3-207ENST00000539204 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 GABRG3Q99928 467 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 SLC6A17Q9H1V8 727 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 ITM2CQ9NQX7 267 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 SPHK2Q9NRA0 654 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 KNL1Q8NG31 2342 aa12.85□□□□□ -0.35
YBX3-207ENST00000539204 CABIN1Q9Y6J0 2220 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 METTL12A8MUP2 240 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 TRIM24O15164 1050 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 HOXC11O43248 304 aaPredicted RBP12.84□□□□□ -0.35
YBX3-207ENST00000539204 BDNFP23560 247 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 OXTRP30559 389 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 GRK6P43250 576 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 CSNK1EP49674 416 aaKnown RBP12.84□□□□□ -0.35
YBX3-207ENST00000539204 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
YBX3-207ENST00000539204 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 MYO1EQ12965 1108 aa12.84□□□□□ -0.35
YBX3-207ENST00000539204 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms