RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 RTL10Q7L3V2 364 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 GIPC2Q8TF65 315 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 SLC35F5Q8WV83 523 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 RFFLQ8WZ73 363 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 SPATA17Q96L03 361 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 PNPLA8Q9NP80 782 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 ZDHHC7Q9NXF8 308 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 BRWD1Q9NSI6 2320 aa18.14■□□□□ 0.49
CLN6-202ENST00000538696 SZT2Q5T011 3432 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 ANAPC1Q9H1A4 1944 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 GRID2IPA4D2P6 1211 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CTAGE9A4FU28 777 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 TNFRSF10BO14763 440 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CCL16O15467 120 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 ATMINO43313 823 aaPredicted RBP18.13■□□□□ 0.49
CLN6-202ENST00000538696 PAPLNO95428 1278 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 LSM8O95777 96 aaKnown RBP18.13■□□□□ 0.49
CLN6-202ENST00000538696 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
CLN6-202ENST00000538696 ALDH1A3P47895 512 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 RGS7P49802 495 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 SLC8A3P57103 927 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CENPCQ03188 943 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 ANKRD54Q6NXT1 300 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 PMF1Q6P1K2 205 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 C12orf76Q8N812 135 aaPredicted RBP18.13■□□□□ 0.49
CLN6-202ENST00000538696 TRIM58Q8NG06 486 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CPA5Q8WXQ8 436 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 ZNF653Q96CK0 615 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 PABPC5Q96DU9 382 aaKnown RBP18.13■□□□□ 0.49
CLN6-202ENST00000538696 ALS2CR12Q96Q35 445 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 UBXN6Q9BZV1 441 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 SFXN1Q9H9B4 322 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CLEC1BQ9P126 229 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 CEP83Q9Y592 693 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 DENND4AQ7Z401 1863 aa18.13■□□□□ 0.49
CLN6-202ENST00000538696 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 SLC38A8A6NNN8 435 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 PALMO75781 387 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 GABBR2O75899 941 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 URI1O94763 535 aaPredicted RBP18.12■□□□□ 0.49
CLN6-202ENST00000538696 ATP1A1P05023 1023 aaKnown RBP18.12■□□□□ 0.49
CLN6-202ENST00000538696 POU2F2P09086 479 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 HNRNPA1P09651 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLN6-202ENST00000538696 SLC5A3P53794 718 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 EPHB3P54753 998 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 DLX2Q07687 328 aaPredicted RBP18.12■□□□□ 0.49
CLN6-202ENST00000538696 PDCLQ13371 301 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 MTMR3Q13615 1198 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 CCDC85BQ15834 202 aaPredicted RBP18.12■□□□□ 0.49
CLN6-202ENST00000538696 SYCE2Q6PIF2 218 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 MCOLN2Q8IZK6 566 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 TMEM35BQ8NCS4 154 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 TPCN2Q8NHX9 752 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 ZNF707Q96C28 371 aaPredicted RBP18.12■□□□□ 0.49
CLN6-202ENST00000538696 CEP295NLQ96MC4 621 aa18.12■□□□□ 0.49
CLN6-202ENST00000538696 ENC1O14682 589 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 RIOK3O14730 519 aaKnown RBP18.11■□□□□ 0.49
CLN6-202ENST00000538696 NCK2O43639 380 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 CYP1A2P05177 515 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 LTBRP36941 435 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 NSFP46459 744 aaKnown RBP18.11■□□□□ 0.49
CLN6-202ENST00000538696 RPL34P49207 117 aaKnown RBP18.11■□□□□ 0.49
CLN6-202ENST00000538696 USP46P62068 366 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 GPC5P78333 572 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 VEPH1Q14D04 833 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 PTPN20Q4JDL3 420 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 MON1BQ7L1V2 547 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 CMASQ8NFW8 434 aaPredicted RBP18.11■□□□□ 0.49
CLN6-202ENST00000538696 SLC35G2Q8TBE7 412 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 STK32AQ8WU08 396 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 KCTD13Q8WZ19 329 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 PSMG2Q969U7 264 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 SLC4A5Q9BY07 1137 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 PRKD2Q9BZL6 878 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 OSGEPQ9NPF4 335 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 TJP2Q9UDY2 1190 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 CHORDC1Q9UHD1 332 aaPredicted RBP18.11■□□□□ 0.49
CLN6-202ENST00000538696 COG5Q9UP83 839 aa18.11■□□□□ 0.49
CLN6-202ENST00000538696 CCDC195A0A1B0GUA6 201 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 PIK3R2O00459 728 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 CSH1P0DML2 217 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 CSH2P0DML3 217 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 HMGA1P17096 107 aaKnown RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 ADIGQ0VDE8 80 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 TCEAL1Q15170 157 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 IFI16Q16666 785 aaKnown RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 RARS2Q5T160 578 aaKnown RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 DENND5BQ6ZUT9 1274 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 PHF13Q86YI8 300 aaPredicted RBP18.1■□□□□ 0.49
CLN6-202ENST00000538696 NUP93Q8N1F7 819 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 SCAMP5Q8TAC9 235 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 HSFY1Q96LI6 401 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 C11orf70Q9BRQ4 267 aa18.1■□□□□ 0.49
CLN6-202ENST00000538696 APOL5Q9BWW9 433 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms