RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PPIDQ08752 370 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 BAATQ14032 418 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 NCF4Q15080 339 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 USP39Q53GS9 565 aaKnown RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 BNC2Q6ZN30 1099 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TPCN2Q8NHX9 752 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SGF29Q96ES7 293 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 ADAM30Q9UKF2 790 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TMCC3Q9ULS5 477 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 IGSF9BQ9UPX0 1349 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SUPT7LO94864 414 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 PGM3O95394 542 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 KLRC1P26715 233 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CDC16Q13042 620 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 NYAP1Q6ZVC0 841 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 NEK10Q6ZWH5 1172 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 OOSP2Q86WS3 158 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SLC13A5Q86YT5 568 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 LPAR1Q92633 364 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 TRAPPC9Q96Q05 1148 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 SHCBP1LQ9BZQ2 653 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 KLHL4Q9C0H6 718 aa10.28□□□□□ -0.76
COL4A6-208ENST00000538570 PNMA8BQ9ULN7 279 aaPredicted RBP10.28□□□□□ -0.76
COL4A6-208ENST00000538570 CTSHP09668 335 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 ERAP2Q6P179 960 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 SP8Q8IXZ3 490 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 RTL3Q8N8U3 475 aaKnown RBP10.27□□□□□ -0.76
COL4A6-208ENST00000538570 ATP8B4Q8TF62 1192 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 CASKIN2Q8WXE0 1202 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 PNKPQ96T60 521 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 ISCA1Q9BUE6 129 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.76
COL4A6-208ENST00000538570 C2orf81A6NN90 581 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 TRIM24O15164 1050 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 STX7O15400 261 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 ARMC3Q5W041 872 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PLA2G4FQ68DD2 849 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 MRNIPQ6NTE8 343 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 CYP4Z1Q86W10 505 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PPP2R3CQ969Q6 453 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 TEX13BQ9BXU2 312 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 NRDE2Q9H7Z3 1164 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 RPS6KA5O75582 802 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 ATP6V0D2Q8N8Y2 350 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 JADE3Q92613 823 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 DNAJC7Q99615 494 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 SMAD5Q99717 465 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PABPC3Q9H361 631 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 NAGPAQ9UK23 515 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 SNX13Q9Y5W8 968 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 H3BQF6 201 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 RGS20O76081 388 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 CYP2C8P10632 490 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 RPS7P62081 194 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 SCRN3Q0VDG4 424 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 MMRN1Q13201 1228 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 GALNTL6Q49A17 601 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 BOLA3Q53S33 107 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 USP13Q92995 863 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 NSUN4Q96CB9 384 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 MRPL48Q96GC5 212 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PEX5P50542 639 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 CSE1LP55060 971 aaKnown RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 DENND5BQ6ZUT9 1274 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 FAM9CQ8IZT9 166 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 ANKRD49Q8WVL7 239 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 HPDLQ96IR7 371 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 ZSWIM1Q9BR11 485 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PI4K2AQ9BTU6 479 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 PRMT7Q9NVM4 692 aaPredicted RBP10.27□□□□□ -0.77
COL4A6-208ENST00000538570 AXIN2Q9Y2T1 843 aa10.27□□□□□ -0.77
COL4A6-208ENST00000538570 ARPC4-TTLL3A0A0A6YYG9 625 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 MAPK7Q13164 816 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 OR8H2Q8N162 312 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 ARHGEF40Q8TER5 1519 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 KDM6AO15550 1401 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 SAC3D1A6NKF1 404 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 F8VZ95 297 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 PMPCBO75439 489 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 C21orf59P57076 290 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 NFYCQ13952 458 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 PKN2Q16513 984 aaKnown RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 SBK1Q52WX2 424 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 ZKSCAN4Q969J2 545 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 FANCEQ9HB96 536 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 AAR2Q9Y312 384 aaKnown RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 TIMM44O43615 452 aa10.26□□□□□ -0.77
COL4A6-208ENST00000538570 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 ATF4P18848 351 aaPredicted RBP10.26□□□□□ -0.77
COL4A6-208ENST00000538570 CALB2P22676 271 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms