RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SLC35F6Q8N357 371 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 C3orf20Q8ND61 904 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GIPC2Q8TF65 315 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ATRIPQ8WXE1 791 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 KCTD13Q8WZ19 329 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 C8orf48Q96LL4 319 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MCEEQ96PE7 176 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CLSTN3Q9BQT9 956 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 VN1R3Q9BXE9 311 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PBX4Q9BYU1 374 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 OSGEPQ9NPF4 335 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CNGB3Q9NQW8 809 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 DPP7Q9UHL4 492 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CYTH4Q9UIA0 394 aa11.2□□□□□ -0.62
TNFRSF1A-211ENST00000538363 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SIGLEC16A6NMB1 481 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TEX28O15482 410 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GLUD1P00367 558 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SPATA31D3P0C874 917 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ATF2P15336 505 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PDGFRAP16234 1089 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GPD1P21695 349 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 YWHAQP27348 245 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SDC4P31431 198 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GABRB2P47870 512 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ERVFC1P60507 584 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MAMLD1Q13495 774 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RPS6KA1Q15418 735 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PKDCCQ504Y2 493 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SDHAF4Q5VUM1 108 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PLEKHA7Q6IQ23 1121 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RSPO2Q6UXX9 243 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SPATA31D4Q6ZUB0 917 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ITIH5Q86UX2 942 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ARHGAP18Q8N392 663 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 UBL4BQ8N7F7 174 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RNF139Q8WU17 664 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 FBXO32Q969P5 355 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TIFAQ96CG3 184 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ZNF512Q96ME7 567 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 KLHL5Q96PQ7 755 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SLITRK1Q96PX8 696 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PKMYT1Q99640 499 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ULBP1Q9BZM6 244 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NACA2Q9H009 215 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ASNSD1Q9NWL6 643 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MAFFQ9ULX9 164 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NENFQ9UMX5 172 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 YBX2Q9Y2T7 364 aaKnown RBP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TSC2P49815 1807 aa11.19□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 VWA8A3KMH1 1905 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ATG2AQ2TAZ0 1938 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 A0A1W2PPC1 479 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SLC38A8A6NNN8 435 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 C5orf67F2Z3F1 127 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 H3BNC9 293 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GRM6O15303 877 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 ADAM12O43184 909 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TBC1D4O60343 1298 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 HSF2BPO75031 334 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SOAT2O75908 522 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 URI1O94763 535 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GJB6O95452 261 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 FTCDO95954 541 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CNPP09543 421 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CSH1P0DML2 217 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CSH2P0DML3 217 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RALAP11233 206 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GJC1P36383 396 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 CETN2P41208 172 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 YWHAZP63104 245 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MRPS5P82675 430 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 HADHQ16836 314 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 PPM1LQ5SGD2 360 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 SCYL2Q6P3W7 929 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MRPL43Q8N983 215 aaKnown RBP11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 GPR152Q8TDT2 470 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 RNF34Q969K3 372 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 MCRS1Q96EZ8 462 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 BTBD6Q96KE9 485 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 NCAPGQ9BPX3 1015 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
TNFRSF1A-211ENST00000538363 TLE6Q9H808 572 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms