RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GJD3Q8N144 294 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 ELMOD1Q8N336 334 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
CHFR-216ENST00000538235 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
CHFR-216ENST00000538235 ASIC4Q96FT7 647 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
CHFR-216ENST00000538235 CYP2S1Q96SQ9 504 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 PCDHB18PQ96TA0 734 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 ULBP1Q9BZM6 244 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 RNF38Q9H0F5 515 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 PNPLA8Q9NP80 782 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 MUTYHQ9UIF7 546 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 NUDT5Q9UKK9 219 aa13.81□□□□□ -0.2
CHFR-216ENST00000538235 A0A1W2PQH9 124 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 MDM4O15151 490 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 USP17L7P0C7H9 530 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 YWHAQP27348 245 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 TKTL1P51854 596 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 PTPN20Q4JDL3 420 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 CYP4A22Q5TCH4 519 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 VITQ6UXI7 678 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 MAB21L3Q8N8X9 362 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
CHFR-216ENST00000538235 FBXO32Q969P5 355 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
CHFR-216ENST00000538235 CPXM1Q96SM3 734 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 KCNK12Q9HB15 430 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 CHORDC1Q9UHD1 332 aaPredicted RBP13.8□□□□□ -0.2
CHFR-216ENST00000538235 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
CHFR-216ENST00000538235 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
CHFR-216ENST00000538235 TBX18O95935 607 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 ERBB2P04626 1255 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 TPM2P07951 284 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 SETSIPP0DME0 302 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 CDC25CP30307 473 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 PDCLQ13371 301 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 GRM2Q14416 872 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
CHFR-216ENST00000538235 LEMD2Q8NC56 503 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 KCTD13Q8WZ19 329 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 CEP295NLQ96MC4 621 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 TASP1Q9H6P5 420 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHFR-216ENST00000538235 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 SCML2Q9UQR0 700 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
CHFR-216ENST00000538235 SHISA7A6NL88 538 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 YJEFN3A6XGL0 299 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 E5RJQ4 531 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 E7ENQ6 273 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 ZNF197O14709 1029 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 PAPSS1O43252 624 aaPredicted RBP13.78□□□□□ -0.2
CHFR-216ENST00000538235 COCHO43405 550 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 RTN3O95197 1032 aaPredicted RBP13.78□□□□□ -0.2
CHFR-216ENST00000538235 FYNP06241 537 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 LCP1P13796 627 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 CDH5P33151 784 aaPredicted RBP13.78□□□□□ -0.2
CHFR-216ENST00000538235 DAOAP59103 153 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 NOMO3P69849 1222 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 PITX1P78337 314 aaPredicted RBP13.78□□□□□ -0.2
CHFR-216ENST00000538235 ARID5AQ03989 594 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 USP4Q13107 963 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 HGSNATQ68CP4 663 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 PM20D1Q6GTS8 502 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 MON1AQ86VX9 555 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 ARID3BQ8IVW6 561 aaPredicted RBP13.78□□□□□ -0.2
CHFR-216ENST00000538235 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 P2RY11Q96G91 374 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 FAM81BQ96LP2 452 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 UBXN6Q9BZV1 441 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 TRPV4Q9HBA0 871 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
CHFR-216ENST00000538235 ARNTLO00327 626 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 GREM1O60565 184 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
CHFR-216ENST00000538235 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
CHFR-216ENST00000538235 PTK2Q05397 1052 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 PTP4A2Q12974 167 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 TAF5Q15542 800 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 ZNF77Q15935 545 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 TAF12Q16514 161 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 MEA1Q16626 185 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 FIGNQ5HY92 759 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 TRNP1Q6NT89 227 aa13.77□□□□□ -0.21
CHFR-216ENST00000538235 ITIH6Q6UXX5 1313 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms