RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 NEK5Q6P3R8 708 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 KIAA0408Q6ZU52 694 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 VPS33AQ96AX1 596 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CNPY3Q9BT09 278 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 VAV3Q9UKW4 847 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ASAP1Q9ULH1 1129 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 GPC6Q9Y625 555 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ARHGEF40Q8TER5 1519 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PHF3Q92576 2039 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZSCAN5CA6NGD5 496 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SLC45A4Q5BKX6 768 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PI16Q6UXB8 463 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SLC13A5Q86YT5 568 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TTC30BQ8N4P2 665 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 MSL3Q8N5Y2 521 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EMC3Q9P0I2 261 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DUSP12Q9UNI6 340 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SNX8Q9Y5X2 465 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FASP25445 335 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CLCN2P51788 898 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PARVAQ9NVD7 372 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PSMD11O00231 422 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DDX3XO00571 662 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L8P0C7I0 530 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC166P0CW27 439 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 RALAP11233 206 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HK2P52789 917 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 UBE3CQ15386 1083 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PROSER3Q2NL68 480 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PARP10Q53GL7 1025 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SULT1C3Q6IMI6 304 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CYP2R1Q6VVX0 501 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FBXO25Q8TCJ0 367 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PHF23Q9BUL5 403 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 RPF1Q9H9Y2 349 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 AKT3Q9Y243 479 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TK2O00142 265 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TRMUO75648 421 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 UPP2O95045 317 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 MAGEA10P43363 369 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FMO5P49326 533 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SLC16A1P53985 500 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EIF4A1P60842 406 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 COPZ1P61923 177 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CSNK2BP67870 215 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CHRNDQ07001 517 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 PPP1R15BQ5SWA1 713 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TTC7BQ86TV6 843 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EXOC3L1Q86VI1 746 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DMRTB1Q96MA1 342 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 WRNIP1Q96S55 665 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DOCK6Q96HP0 2047 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EFCAB10A6NFE3 127 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 WFS1O76024 890 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 IFI30P13284 250 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 HOXA13P31271 388 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SLC16A2P36021 539 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 CENPCQ03188 943 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 MTFR1Q15390 333 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DQX1Q8TE96 717 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TBC1D10AQ9BXI6 508 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 H2AFY2Q9P0M6 372 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DGKBQ9Y6T7 804 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 DFFAO00273 331 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ANPEPP15144 967 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ITGA3P26006 1051 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 NCALDP61601 193 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ACAP2Q15057 778 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF667Q5HYK9 610 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 TMEM26Q6ZUK4 368 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 STK32CQ86UX6 486 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EPHX4Q8IUS5 362 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 APPL2Q8NEU8 664 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 SH3TC2Q8TF17 1288 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 IP6K1Q92551 441 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF75CPQ92670 426 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 EFHD2Q96C19 240 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 C7orf25Q9BPX7 421 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 OSBPL6Q9BZF3 934 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 ITM2BQ9Y287 266 aa5.85□□□□□ -1.47
CSMD1-215ENST00000537824 RTCBQ9Y3I0 505 aaKnown RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 INO80Q9ULG1 1556 aaPredicted RBP5.85□□□□□ -1.47
CSMD1-215ENST00000537824 A0A087X0T9 212 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 AREL1O15033 823 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FAM228BP0C875 321 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ADSSP30520 456 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 HOXC9P31274 260 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SDC4P31431 198 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TAP1Q03518 808 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 C5orf22Q49AR2 442 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 KRT77Q7Z794 578 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ATG16L2Q8NAA4 619 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FAR2Q96K12 515 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 DNAJC7Q99615 494 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms