RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 B3GALNT2Q8NCR0 500 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 OR5B17Q8NGF7 314 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 KBTBD7Q8WVZ9 684 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 HMGB4Q8WW32 186 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CCDC127Q96BQ5 260 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF396Q96N95 335 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CGRRF1Q99675 332 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 DEC1Q9P2X7 70 aa9.5□□□□□ -0.89
SMAD3-203ENST00000537194 NXF1Q9UBU9 619 aaKnown RBP9.5□□□□□ -0.89
SMAD3-203ENST00000537194 MORC2Q9Y6X9 1032 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-203ENST00000537194 CACNA1EQ15878 2313 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 USP24Q9UPU5 2620 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 TCRBV21S2A2A0A5A6 115 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 OAS1P00973 400 aaKnown RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 SYT1P21579 422 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 P2RY2P41231 377 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 MAPK8P45983 427 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 USP46P62068 366 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 KDSRQ06136 332 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 GFPT1Q06210 699 aaPredicted RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 CYP24A1Q07973 514 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 PSMD6Q15008 389 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 CCDC142Q17RM4 750 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 ANO4Q32M45 955 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF667Q5HYK9 610 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 LIMS2Q7Z4I7 341 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 TMEFF1Q8IYR6 380 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 GOLGA5Q8TBA6 731 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 SCFD1Q8WVM8 642 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 SMARCD1Q96GM5 515 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 XPO6Q96QU8 1125 aaKnown RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 RNF38Q9H0F5 515 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 FBXO44Q9H4M3 255 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.894e-9■■■■■ 304.9
SMAD3-203ENST00000537194 COMMD8Q9NX08 183 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 LSM7Q9UK45 103 aaKnown RBP9.49□□□□□ -0.89
SMAD3-203ENST00000537194 CEP295Q9C0D2 2601 aa9.49□□□□□ -0.89
SMAD3-203ENST00000537194 SPTLC2O15270 562 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 EXOC3O60645 756 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 NDUFS2O75306 463 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF217O75362 1048 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 SYPP08247 313 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 BCKDHBP21953 392 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 SLC6A11P48066 632 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 TUBP50607 506 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 RPL6Q02878 288 aaKnown RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 CUL4AQ13619 759 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 HNRNPDQ14103 355 aaKnown RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 E2F5Q15329 346 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 DUOXA1Q1HG43 343 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF699Q32M78 642 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 LY6G5CQ5SRR4 150 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 SYCP2LQ5T4T6 812 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 RHBDF2Q6PJF5 856 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ARMCX6Q7L4S7 300 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 NELFCDQ8IXH7 590 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF513Q8N8E2 541 aaPredicted RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 IL17RCQ8NAC3 791 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 OLIG1Q8TAK6 271 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF507Q8TCN5 953 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 RLN3Q8WXF3 142 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 DHX58Q96C10 678 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 INTS4Q96HW7 963 aaKnown RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 FAM84AQ96KN4 292 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 TRIM9Q9C026 710 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 ZNF518BQ9C0D4 1074 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 DMAP1Q9NPF5 467 aaPredicted RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 TLR8Q9NR97 1041 aaKnown RBP9.48□□□□□ -0.89
SMAD3-203ENST00000537194 SPHK2Q9NRA0 654 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 FAM13BQ9NYF5 915 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 SLC6A14Q9UN76 642 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 PLXND1Q9Y4D7 1925 aa9.48□□□□□ -0.89
SMAD3-203ENST00000537194 A0A0A0MRY4 1105 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 PATE3B3GLJ2 98 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 H0Y626 953 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 SGK1O00141 431 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 SCAMP3O14828 347 aaKnown RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 GIPC1O14908 333 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 CLIC2O15247 247 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 STX6O43752 255 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 CUTAO60888 179 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 OPHN1O60890 802 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 PPP6R2O75170 966 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 TRIM16O95361 564 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 OLFM2O95897 454 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 CST3P01034 146 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 GNSP15586 552 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 NTSR1P30989 418 aa9.47□□□□□ -0.89
SMAD3-203ENST00000537194 NASPP49321 788 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-203ENST00000537194 MYL6P60660 151 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms