RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 VSTM1Q6UX27 236 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 SV2BQ7L1I2 683 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 DYMQ7RTS9 669 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 C11orf74Q86VG3 221 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 GPD1LQ8N335 351 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 ASCC3Q8N3C0 2202 aaKnown RBP5.61□□□□□ -1.51
SNHG1-204ENST00000537068 ARL14EPQ8N8R7 260 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-204ENST00000537068 SH3RF2Q8TEC5 729 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 TCEAL3Q969E4 200 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 ACDQ96AP0 544 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CHAMP1Q96JM3 812 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CNOT6LQ96LI5 555 aaKnown RBP5.61□□□□□ -1.51
SNHG1-204ENST00000537068 ACCSQ96QU6 501 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 HHIPQ96QV1 700 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 FAM213AQ9BRX8 229 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 FGFBP2Q9BYJ0 223 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 RNF38Q9H0F5 515 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 SMOC1Q9H4F8 434 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 ZHX3Q9H4I2 956 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 MRPL44Q9H9J2 332 aaKnown RBP5.61□□□□□ -1.51
SNHG1-204ENST00000537068 PDE11AQ9HCR9 933 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CRTAC1Q9NQ79 661 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 INTS13Q9NVM9 706 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CCDC39Q9UFE4 941 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 EVLQ9UI08 416 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CDH9Q9ULB4 789 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 MMP17Q9ULZ9 603 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 EXOC7Q9UPT5 735 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 NME7Q9Y5B8 376 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 SNX9Q9Y5X1 595 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CLIC4Q9Y696 253 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 WNT6Q9Y6F9 365 aa5.61□□□□□ -1.51
SNHG1-204ENST00000537068 CNOT1A5YKK6 2376 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PLXNB3Q9ULL4 1909 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PTPRJQ12913 1337 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 A0A087X0B3 334 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 FAM221BA6H8Z2 402 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ZNF840PA6NDX5 716 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 C4orf47A7E2U8 309 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 UPK3BL1B0FP48 263 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ESPNB1AK53 854 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 UPK3BL2E5RIL1 263 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 LEFTY2O00292 366 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 GIPC1O14908 333 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 LZTS3O60299 673 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ATP2C2O75185 946 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 TACC1O75410 805 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 NFATC1O95644 943 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 STAU1O95793 577 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 OAS1P00973 400 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 NEFLP07196 543 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 HNRNPLP14866 589 aaKnown RBP eCLIP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 BCKDHBP21953 392 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 WARSP23381 471 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 HOXD13P35453 343 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SCNN1AP37088 669 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 P2RY2P41231 377 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 KIR2DL1P43626 348 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 IFNAR2P48551 515 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PDE6CP51160 858 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 DGKEP52429 567 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 IRX4P78413 519 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 TFAMQ00059 246 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 CREB5Q02930 508 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MESP2Q0VG99 397 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SURF1Q15526 300 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ELF2Q15723 593 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 USP39Q53GS9 565 aaKnown RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SNX30Q5VWJ9 437 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PEAR1Q5VY43 1037 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 CNNM4Q6P4Q7 775 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SLC23A3Q6PIS1 610 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 RHBDF2Q6PJF5 856 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 C4orf50Q6ZRC1 276 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 DENND5BQ6ZUT9 1274 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SPATA2LQ8IUW3 424 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ADGRF2Q8IZF7 708 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 IL17RCQ8NAC3 791 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MDGA1Q8NFP4 955 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 OR5B17Q8NGF7 314 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MYCBPAPQ8TBZ2 947 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SAAL1Q96ER3 474 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PCED1BQ96HM7 432 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 C8orf48Q96LL4 319 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 KCTD15Q96SI1 283 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SYT15Q9BQS2 421 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 CBWD1Q9BRT8 395 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 EDEM2Q9BV94 578 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MTMR12Q9C0I1 747 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 TMEM30AQ9NV96 361 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 RBAKQ9NYW8 714 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 IL37Q9NZH6 218 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 MAGEC2Q9UBF1 373 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 SMC3Q9UQE7 1217 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-204ENST00000537068 CFAP47Q6ZTR5 3102 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 PTPRBP23467 1997 aa5.6□□□□□ -1.51
SNHG1-204ENST00000537068 FAM92AA1XBS5 289 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms