RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FAM35AQ86V20 835 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PAGE5Q96GU1 130 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PNKPQ96T60 521 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RXFP3Q9NSD7 469 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 DMAC2Q9NW81 257 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TBC1D14Q9P2M4 693 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RCOR1Q9UKL0 485 aa20.89■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CFAP47Q6ZTR5 3102 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ACTN4O43707 911 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ADH1CP00326 375 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 GBP1P32455 592 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 EIF2DP41214 584 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 MRPS21P82921 87 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 DNM1Q05193 864 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 USP39Q53GS9 565 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 HECTD3Q5T447 861 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RHBDF2Q6PJF5 856 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SCARA5Q6ZMJ2 495 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PAQR9Q6ZVX9 377 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 C11orf74Q86VG3 221 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SLC9A9Q8IVB4 645 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KIAA0895Q8NCT3 520 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TMEM174Q8WUU8 243 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SMARCD1Q96GM5 515 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SMOC1Q9H4F8 434 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 DMAP1Q9NPF5 467 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CHORDC1Q9UHD1 332 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 MMP17Q9ULZ9 603 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 THADAQ6YHU6 1953 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CHD6Q8TD26 2715 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 FRYQ5TBA9 3013 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 GON4LQ3T8J9 2241 aa20.88■□□□□ 0.93
TNFRSF1B-204ENST00000536782 E2F8A0AVK6 867 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 COCHO43405 550 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KRT37O76014 449 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 VNN1O95497 513 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 P4HA1P13674 534 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KCNA4P22459 653 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SLC6A11P48066 632 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SLC5A3P53794 718 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CREB5Q02930 508 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PKP1Q13835 747 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CRY1Q16526 586 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SGSM1Q2NKQ1 1148 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KMT5BQ4FZB7 885 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 STPG1Q5TH74 334 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SNX30Q5VWJ9 437 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ANO7Q6IWH7 933 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RASSF3Q86WH2 238 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CCDC33Q8N5R6 958 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SCAMP5Q8TAC9 235 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ELMO3Q96BJ8 720 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CNOT6LQ96LI5 555 aaKnown RBP20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TPSD1Q9BZJ3 242 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SDCBP2Q9H190 292 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 COMMD8Q9NX08 183 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 INVSQ9Y283 1065 aa20.87■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ANTXRLA6NF34 631 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PDXKO00764 312 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TNFRSF10BO14763 440 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KAT7O95251 611 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RPN1P04843 607 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 APODP05090 189 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ADH5P11766 374 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TUBP50607 506 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 DLG4P78352 724 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ACOT1Q86TX2 421 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 OTUB2Q96DC9 234 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KCTD10Q9H3F6 313 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KRT82Q9NSB4 513 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 IL37Q9NZH6 218 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SH3BP1Q9Y3L3 701 aa20.86■□□□□ 0.93
TNFRSF1B-204ENST00000536782 BCLAF3A2AJT9 711 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TM4SF5O14894 197 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 AP1G2O75843 785 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CAVIN2O95810 425 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 NR3C1P04150 777 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 GRIA2P42262 883 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ZACNQ401N2 412 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 HSF5Q4G112 596 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TCEAL6Q6IPX3 200 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 C12orf40Q86WS4 652 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 FUKQ8N0W3 1084 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TMC2Q8TDI7 906 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TAF4BQ92750 862 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TCEAL3Q969E4 200 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ZFRQ96KR1 1074 aaKnown RBP20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CCSER2Q9H7U1 834 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ARHGEF4Q9NR80 690 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 USP25Q9UHP3 1055 aa20.85■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PI4KAP42356 2102 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 A0A0A0MRY4 1105 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 FAM92AA1XBS5 289 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 IKBKBO14920 756 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ALDH1A2O94788 518 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 MYL1P05976 194 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ZDHHC11BP0C7U3 371 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PFKFB1P16118 471 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TIE1P35590 1138 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms