RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 C22orf31O95567 290 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 KCTD2Q14681 263 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 SH3PXD2AQ5TCZ1 1133 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 MAP1SQ66K74 1059 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 CYP4V2Q6ZWL3 525 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 ILDR2Q71H61 639 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 NLRP9Q7RTR0 991 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 SLC7A6OSQ96CW6 309 aaPredicted RBP16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 PNPLA8Q9NP80 782 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 NPHS2Q9NP85 383 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 PAK5Q9P286 719 aa16.72■□□□□ 0.27
CHMP1A-202ENST00000535997 WDR91A4D1P6 747 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 GOLGA8RI6L899 631 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 LPXNO60711 386 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 STAU1O95793 577 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 INHBAP08476 426 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 DHRS4L1P0CG22 281 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 SLC18A2Q05940 514 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 PTK7Q13308 1070 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 MTM1Q13496 603 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 AMHR2Q16671 573 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 KBTBD12Q3ZCT8 623 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 PLEKHG4Q58EX7 1191 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 SH2D5Q6ZV89 423 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 FAF2Q96CS3 445 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 ZBTB10Q96DT7 871 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 SLC17A7Q9P2U7 560 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 ZFP69BQ9UJL9 534 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 LRRC37A2A6NM11 1700 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 CFAP69A5D8W1 941 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 H7C0C1 242 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TGDSO95455 350 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 ETV4P43268 484 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 ATP5OP48047 213 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 CCNG1P51959 295 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 NDST1P52848 882 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 NRLP54845 237 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 RBP5P82980 135 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TMEM132DQ14C87 1099 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 STILQ15468 1287 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TAF1BQ53T94 588 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 OR6B2Q6IFH4 312 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 NPNTQ6UXI9 565 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 MTDHQ86UE4 582 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 CHSY1Q86X52 802 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 FBXO16Q8IX29 292 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 PLD5Q8N7P1 536 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 COPS5Q92905 334 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 RTP4Q96DX8 246 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TBC1D10AQ9BXI6 508 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 TRIM55Q9BYV6 548 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 PDZD7Q9H5P4 517 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
CHMP1A-202ENST00000535997 LOC102724159A0A0B4J2E5 919 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 KBTBD13C9JR72 458 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 FAM155BO75949 473 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 RPSAP08865 295 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 IL4RP24394 825 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 PWP2Q15269 919 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TRNP1Q6NT89 227 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 NT5DC4Q86YG4 428 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 MMP19Q99542 508 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 KLF6Q99612 283 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 NT5C1AQ9BXI3 368 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 RAB6BQ9NRW1 208 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 RBPJLQ9UBG7 517 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 LNPEPQ9UIQ6 1025 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 A0A087WZ62 844 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 E5RJQ4 531 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 CXCL11O14625 94 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 INSRRP14616 1297 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TGM2P21980 687 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 PTPN4P29074 926 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 YWHAGP61981 247 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 KRT81Q14533 505 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 C15orf59Q2T9L4 293 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 Q3C1V9 767 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 FAM183BPQ6ZVS7 135 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 CLNKQ7Z7G1 428 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 SLC26A11Q86WA9 606 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TMEM130Q8N3G9 435 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TEKT4Q8WW24 435 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 USP6NLQ92738 828 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 APOPT1Q96IL0 206 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TBCBQ99426 244 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 FDXACB1Q9BRP7 624 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 GBA2Q9HCG7 927 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TSPAN16Q9UKR8 245 aa16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 RPL26L1Q9UNX3 145 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-202ENST00000535997 TRDMT1O14717 391 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms