RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 PON2Q15165 354 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 EML3Q32P44 896 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 PAQR9Q6ZVX9 377 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ELOA2Q8IYF1 753 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 FMR1NBQ8N0W7 255 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 NUP93Q8N1F7 819 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ARL14EPQ8N8R7 260 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 SPATA20Q8TB22 786 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ATP2A3Q93084 1043 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 CYP2S1Q96SQ9 504 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ZNF518BQ9C0D4 1074 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 SDCBP2Q9H190 292 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 FAM124BQ9H5Z6 455 aaPredicted RBP11.47□□□□□ -0.57
CCDC60-202ENST00000535685 ECT2Q9H8V3 914 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 CYP3A43Q9HB55 503 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 CSNK1G1Q9HCP0 422 aa11.47□□□□□ -0.57
CCDC60-202ENST00000535685 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CCDC163A0A0D9SF12 145 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CHURC1-FNTBB4DL54 471 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 K7ESF4 209 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 RNF40O75150 1001 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 OAS1P00973 400 aaKnown RBP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 HLA-DRAP01903 254 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 ZDHHC11BP0C7U3 371 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 DRD1P21728 446 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 TUBP50607 506 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CACNA2D1P54289 1103 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CDH8P55286 799 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 SATB1Q01826 763 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 ADAM9Q13443 819 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 FBXO43Q4G163 708 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CEP135Q66GS9 1140 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 FSTL4Q6MZW2 842 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 TSSK4Q6SA08 328 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 FAM35AQ86V20 835 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 CPA6Q8N4T0 437 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 GPR161Q8N6U8 529 aaKnown RBP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 ENGASEQ8NFI3 743 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 SH3RF2Q8TEC5 729 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 SMARCD1Q96GM5 515 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 TIGD1Q96MW7 591 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 SLITRK1Q96PX8 696 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 GSDMAQ96QA5 445 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 TRPC7Q9HCX4 862 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 DMAP1Q9NPF5 467 aaPredicted RBP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 RMND1Q9NWS8 449 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 DUS2Q9NX74 493 aaKnown RBP11.46□□□□□ -0.57
CCDC60-202ENST00000535685 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
CCDC60-202ENST00000535685 GON4LQ3T8J9 2241 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 CLDN5O00501 218 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ATG13O75143 517 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 KRT13P13646 458 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ARSAP15289 507 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 YWHAQP27348 245 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 GJA4P35212 333 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ASPAP45381 313 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 IFNAR2P48551 515 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ZXDBP98169 803 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 PPP3CAQ08209 521 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 TAF10Q12962 218 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 NR1H3Q13133 447 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 TRIM68Q6AZZ1 485 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 Q6ZS52 159 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 DDX42Q86XP3 938 aaKnown RBP eCLIP11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
CCDC60-202ENST00000535685 FAM186BQ8IYM0 893 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 FUKQ8N0W3 1084 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 TTC8Q8TAM2 541 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 HNRNPABQ99729 332 aaKnown RBP11.45□□□□□ -0.58
CCDC60-202ENST00000535685 RNF38Q9H0F5 515 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 GDPD2Q9HCC8 539 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 TMEM8AQ9HCN3 771 aa11.45□□□□□ -0.58
CCDC60-202ENST00000535685 ABCA7Q8IZY2 2146 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 LEFTY2O00292 366 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 SLC9A3R1O14745 358 aaPredicted RBP11.44□□□□□ -0.58
CCDC60-202ENST00000535685 NFATC1O95644 943 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 TRIM21P19474 475 aaKnown RBP11.44□□□□□ -0.58
CCDC60-202ENST00000535685 PIK3CAP42336 1068 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 RAP1GAPP47736 663 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 GALK1P51570 392 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 NDST1P52848 882 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 FOXK2Q01167 660 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 ZNF658Q5TYW1 1059 aaPredicted RBP11.44□□□□□ -0.58
CCDC60-202ENST00000535685 KRT39Q6A163 491 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 ACOT1Q86TX2 421 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 WDR5BQ86VZ2 330 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 LONP2Q86WA8 852 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 TTC39CQ8N584 583 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 ZMIZ2Q8NF64 920 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 CCDC26Q8TAB7 109 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 SECISBP2LQ93073 1101 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms