RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 FAM189A1O60320 539 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 MSCO60682 206 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 KPNA6O60684 536 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 NDUFA10O95299 355 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 LCA5LO95447 670 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 THBDP07204 575 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CYBAP13498 195 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 INSRRP14616 1297 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 UCHL3P15374 230 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SLC9A1P19634 815 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ITIH2P19823 946 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CYP2B6P20813 491 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 HOXC12P31275 282 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 GTF2H1P32780 548 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 LIG4P49917 911 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CLCN3P51790 818 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 VAMP7P51809 220 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 POLR2FP61218 127 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 LACTBP83111 547 aaPredicted RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 APBA1Q02410 837 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CYP24A1Q07973 514 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 TFDP1Q14186 410 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SEPT7Q16181 437 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 CCL14Q16627 93 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 EPC2Q52LR7 807 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SLC35F1Q5T1Q4 408 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 TCERG1LQ5VWI1 586 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SLFN12LQ6IEE8 588 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CCSAPQ6IQ19 270 aaPredicted RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 CYP4F22Q6NT55 531 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 OGFOD3Q6PK18 319 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CACNA2D4Q7Z3S7 1137 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ZAR1Q86SH2 424 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 USP37Q86T82 979 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 TLK2Q86UE8 772 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CBWD2Q8IUF1 395 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ZBTB8OSQ8IWT0 167 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 RAVER1Q8IY67 606 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 GPD1LQ8N335 351 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 LRRC71Q8N4P6 559 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 LMO3Q8TAP4 145 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 PARD3BQ8TEW8 1205 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 TRAPPC12Q8WVT3 735 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 POMGNT1Q8WZA1 660 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 BICD1Q96G01 975 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 FCRL3Q96P31 734 aaPredicted RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 CHP1Q99653 195 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 HDAC8Q9BY41 377 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 FZD8Q9H461 694 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 PCIF1Q9H4Z3 704 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 PCMTD2Q9NV79 361 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ZNHIT6Q9NWK9 470 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 TRMT1Q9NXH9 659 aaKnown RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 AIPL1Q9NZN9 384 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ARHGAP20Q9P2F6 1191 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 SUCLA2Q9P2R7 463 aaPredicted RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 AJAP1Q9UKB5 411 aaPredicted RBP6.13□□□□□ -1.43
CHKA-208ENST00000533910 COQ4Q9Y3A0 265 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 CAPN6Q9Y6Q1 641 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
CHKA-208ENST00000533910 MBLAC1A4D2B0 266 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 LRRIQ3A6PVS8 624 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 EIF3CLB5ME19 914 aaKnown RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 HAS3O00219 553 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CITO14578 2027 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TOM1L1O75674 476 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CRTAMO95727 393 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 SERPING1P05155 500 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PRKCBP05771 671 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PDGFRBP09619 1106 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 ACTN1P12814 892 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 LCP1P13796 627 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TNNT1P13805 278 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 AKR1A1P14550 325 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PROZP22891 400 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 ANXA13P27216 316 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 HOXC8P31273 242 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CYP2C19P33261 490 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CYLC1P35663 651 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 PRKCIP41743 596 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 ARHGAP25P42331 645 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CPT1AP50416 773 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 MXI1P50539 228 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TERF1P54274 439 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PTENP60484 403 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 DLG4P78352 724 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 NKX3-2P78367 333 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 MBTD1Q05BQ5 628 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 MCL1Q07820 350 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PPP3CAQ08209 521 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PPFIA1Q13136 1202 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 TRIP12Q14669 1992 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 PSMD6Q15008 389 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 PTPN14Q15678 1187 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 FAM187BQ17R55 369 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 CLEC16AQ2KHT3 1053 aa6.12□□□□□ -1.43
CHKA-208ENST00000533910 ASTE1Q2TB18 679 aaPredicted RBP6.12□□□□□ -1.43
CHKA-208ENST00000533910 TRIM61Q5EBN2 209 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms