RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PGFP49763 221 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 TNNC1P63316 161 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 AMPD3Q01432 767 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 LY6G5CQ5SRR4 150 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 UNC13DQ70J99 1090 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 NUP93Q8N1F7 819 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 IQUBQ8NA54 791 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 SLITRK1Q96PX8 696 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 SDCBP2Q9H190 292 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 SMYD3Q9H7B4 428 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 SLC39A2Q9NP94 309 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 IL37Q9NZH6 218 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 CEP295Q9C0D2 2601 aa19.18■□□□□ 0.66
UBXN1-216ENST00000533908 SLC9A3R1O14745 358 aaPredicted RBP19.17■□□□□ 0.66
UBXN1-216ENST00000533908 KHNYNO15037 678 aaKnown RBP19.17■□□□□ 0.66
UBXN1-216ENST00000533908 CUTAO60888 179 aa19.17■□□□□ 0.66
UBXN1-216ENST00000533908 C12orf56Q8IXR9 622 aa19.17■□□□□ 0.66
UBXN1-216ENST00000533908 ARHGEF4Q9NR80 690 aa19.17■□□□□ 0.66
UBXN1-216ENST00000533908 MBD1Q9UIS9 605 aaPredicted RBP19.17■□□□□ 0.66
UBXN1-216ENST00000533908 HCN2Q9UL51 889 aa19.17■□□□□ 0.66
UBXN1-216ENST00000533908 FRYQ5TBA9 3013 aa19.17■□□□□ 0.66
UBXN1-216ENST00000533908 CHD6Q8TD26 2715 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 E2F8A0AVK6 867 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 POLR2DO15514 142 aaKnown RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 APODP05090 189 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 ADH5P11766 374 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 ATICP31939 592 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 EIF2DP41214 584 aaKnown RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 P2RY2P41231 377 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 DHPSP49366 369 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 NOVA1P51513 510 aaKnown RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 SNRPFP62306 86 aaKnown RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 KDSRQ06136 332 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 TRPC3Q13507 836 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 CUL4BQ13620 913 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 BMT2Q1RMZ1 405 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 FOXD4L5Q5VV16 416 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 SNX30Q5VWJ9 437 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 NAT16Q8N8M0 369 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 FOXD4L4Q8WXT5 416 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-216ENST00000533908 PIGKQ92643 395 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 CCSER2Q9H7U1 834 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 TMEM74BQ9NUR3 256 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 WASF3Q9UPY6 502 aa19.16■□□□□ 0.66
UBXN1-216ENST00000533908 ZFHX4Q86UP3 3567 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 TRIM24O15164 1050 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 BEST1O76090 585 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 VNN1O95497 513 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 YEATS4O95619 227 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 TOP3BO95985 862 aaKnown RBP19.15■□□□□ 0.66
UBXN1-216ENST00000533908 C4BPAP04003 597 aaKnown RBP19.15■□□□□ 0.66
UBXN1-216ENST00000533908 ZDHHC11BP0C7U3 371 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 GRIA2P42262 883 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 PTGER3P43115 390 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 KNOP1Q1ED39 458 aaKnown RBP19.15■□□□□ 0.66
UBXN1-216ENST00000533908 MAP7D1Q3KQU3 841 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 SH3PXD2AQ5TCZ1 1133 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 CYP2U1Q7Z449 544 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 FAM35AQ86V20 835 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 C11orf74Q86VG3 221 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 TMEM25Q86YD3 366 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 BBS7Q8IWZ6 715 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 ETFBKMTQ8IXQ9 262 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 TMEFF1Q8IYR6 380 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 FUKQ8N0W3 1084 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 ZMIZ2Q8NF64 920 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 PARD3BQ8TEW8 1205 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 FBXO32Q969P5 355 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 SYAP1Q96A49 352 aaPredicted RBP19.15■□□□□ 0.66
UBXN1-216ENST00000533908 VRTNQ9H8Y1 702 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 TBC1D14Q9P2M4 693 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 UBE4BO95155 1302 aa19.15■□□□□ 0.66
UBXN1-216ENST00000533908 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-216ENST00000533908 K7ELQ4 463 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-216ENST00000533908 EXOC3O60645 756 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 PHACTR2O75167 634 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 RTN3O95197 1032 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-216ENST00000533908 ADH1CP00326 375 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 CENPBP07199 599 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-216ENST00000533908 TNFRSF4P43489 277 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 AFMP43652 599 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 CLDN10P78369 228 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 HECTD3Q5T447 861 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 DAB2IPQ5VWQ8 1189 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 ARMCX6Q7L4S7 300 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 GRAMD1CQ8IYS0 662 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 OVCA2Q8WZ82 227 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-216ENST00000533908 TMEM9BQ9NQ34 198 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 GMIPQ9P107 970 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 CFAP47Q6ZTR5 3102 aa19.14■□□□□ 0.65
UBXN1-216ENST00000533908 MYO18AQ92614 2054 aaKnown RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 PVALEFA0A1B0GWK0 134 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 FAM92AA1XBS5 289 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 GREM1O60565 184 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 TULP3O75386 442 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 ALDH1A2O94788 518 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 SPINK2P20155 84 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms