RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SLC35F1Q5T1Q4 408 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 NT5DC1Q5TFE4 455 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 MPZL3Q6UWV2 235 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 KRBA2Q6ZNG9 492 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 UNC13DQ70J99 1090 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 ZNF720Q7Z2F6 126 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 BICD1Q96G01 975 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 CASD1Q96PB1 797 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 TCHPQ9BT92 498 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 C11orf84Q9BUA3 381 aaPredicted RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 CCDC94Q9BW85 323 aaPredicted RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 EIF2AQ9BY44 585 aaKnown RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 TTYH1Q9H313 450 aaPredicted RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 MTMR10Q9NXD2 777 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 TBX20Q9UMR3 447 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 PCDHB12Q9Y5F1 795 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 ACTL7BQ9Y614 415 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 TCHHQ07283 1943 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 GBF1Q92538 1859 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 C5orf67F2Z3F1 127 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
CASP4-212ENST00000533730 CLDN3O15551 220 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 RNGTTO60942 597 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 OFD1O75665 1012 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 GCNT3O95395 438 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 PROZP22891 400 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 ITGB7P26010 798 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 NMT1P30419 496 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 CTNNB1P35222 781 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 PPM1AP35813 382 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 BMPR1AP36894 532 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 MATR3P43243 847 aaKnown RBP eCLIP8.29□□□□□ -1.08
CASP4-212ENST00000533730 AFMP43652 599 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 IL2P60568 153 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 RNASELQ05823 741 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 CYP4F3Q08477 520 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 COASYQ13057 564 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 NOLC1Q14978 699 aaKnown RBP eCLIP8.29□□□□□ -1.08
CASP4-212ENST00000533730 POSTNQ15063 836 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 EPC2Q52LR7 807 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 FAM26FQ5R3K3 315 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 SPOUT1Q5T280 376 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 L1TD1Q5T7N2 865 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 SLFN12LQ6IEE8 588 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 DENND5AQ6IQ26 1287 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 KCNT2Q6UVM3 1135 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 CLEC17AQ6ZS10 378 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 ARMCX6Q7L4S7 300 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 CBARPQ8N350 705 aaPredicted RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 ARNTL2Q8WYA1 636 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 STAMQ92783 540 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 EZH1Q92800 747 aaPredicted RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 LPPQ93052 612 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 P2RX5Q93086 422 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 PAGE5Q96GU1 130 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 CCDC140Q96MF4 163 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 TIGD1Q96MW7 591 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 ZNF558Q96NG5 402 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 GBP4Q96PP9 640 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 ACCSQ96QU6 501 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 FIZ1Q96SL8 496 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 ORAI3Q9BRQ5 295 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 GTPBP4Q9BZE4 634 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 ZNF700Q9H0M5 742 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 LMAN2LQ9H0V9 348 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 CDT1Q9H211 546 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 NXF3Q9H4D5 531 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 TMEM206Q9H813 350 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 TOPORSQ9NS56 1045 aaPredicted RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 EXOC1Q9NV70 894 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 LMCD1Q9NZU5 365 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 STK39Q9UEW8 545 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 GPR55Q9Y2T6 319 aaPredicted RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
CASP4-212ENST00000533730 FHOD1Q9Y613 1164 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 UBE4BO95155 1302 aa8.29□□□□□ -1.08
CASP4-212ENST00000533730 RALGAPA2Q2PPJ7 1873 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 ARL5CA6NH57 179 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 VSTM5A8MXK1 200 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 H3BNC9 293 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 KIAA0391O15091 583 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 KINO60870 393 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 KIF20AO95235 890 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 EDN1P05305 212 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 SCG5P05408 212 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 ALDH7A1P49419 539 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 GATMP50440 423 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 UBE2HP62256 183 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 POU5F1Q01860 360 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 GUCY1A3Q02108 690 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 UBE3AQ05086 875 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 GRIK3Q13003 919 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 EEF1DP3Q658K8 133 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 Q7L0L9 218 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms