RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SHDQ96IW2 340 aa18.18■□□□□ 0.5
CTSB-229ENST00000533572 ZSWIM3Q96MP5 696 aa18.18■□□□□ 0.5
CTSB-229ENST00000533572 PRRX2Q99811 253 aa18.18■□□□□ 0.5
CTSB-229ENST00000533572 MED10Q9BTT4 135 aa18.18■□□□□ 0.5
CTSB-229ENST00000533572 TRMT61BQ9BVS5 477 aaKnown RBP18.18■□□□□ 0.5
CTSB-229ENST00000533572 BRD9Q9H8M2 597 aa18.18■□□□□ 0.5
CTSB-229ENST00000533572 SLC38A8A6NNN8 435 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 NRG2O14511 850 aaPredicted RBP18.17■□□□□ 0.5
CTSB-229ENST00000533572 THAP12O43422 761 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 MFAP3LO75121 409 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 FCARP24071 287 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 AVPR2P30518 371 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 HNRNPH3P31942 346 aaKnown RBP18.17■□□□□ 0.5
CTSB-229ENST00000533572 PRKCIP41743 596 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 VCPP55072 806 aaKnown RBP18.17■□□□□ 0.5
CTSB-229ENST00000533572 GRM2Q14416 872 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 STXBP5Q5T5C0 1151 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 LCLAT1Q6UWP7 414 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 C12orf29Q8N999 325 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 ANKRD52Q8NB46 1076 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 STKLD1Q8NE28 680 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 SLC2A14Q8TDB8 520 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 ZNF606Q8WXB4 792 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 TASP1Q9H6P5 420 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 TRPV4Q9HBA0 871 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 IL21Q9HBE4 155 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 EHD2Q9NZN4 543 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 PCDHGC3Q9UN70 934 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 CEP83Q9Y592 693 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 MUC6Q6W4X9 2439 aa18.17■□□□□ 0.5
CTSB-229ENST00000533572 HEPACAM2A8MVW5 462 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 O00370 1275 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 FAM200BP0CF97 657 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 SETSIPP0DME0 302 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 HMGA1P17096 107 aaKnown RBP18.16■□□□□ 0.5
CTSB-229ENST00000533572 PSMC3P17980 439 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 DDX6P26196 483 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTSB-229ENST00000533572 VIPR2P41587 438 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 CLCN5P51795 746 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 BCAT1P54687 386 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 GSDMDP57764 484 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 ORC1Q13415 861 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 PPP1R26Q5T8A7 1209 aaPredicted RBP18.16■□□□□ 0.5
CTSB-229ENST00000533572 PPP1R2P3Q6NXS1 205 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 TRIM72Q6ZMU5 477 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 FAM35AQ86V20 835 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 SLC47A2Q86VL8 602 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 VPS36Q86VN1 386 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 ARID3BQ8IVW6 561 aaPredicted RBP18.16■□□□□ 0.5
CTSB-229ENST00000533572 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 EPS8L1Q8TE68 723 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
CTSB-229ENST00000533572 SPATA17Q96L03 361 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 DNAJC7Q99615 494 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 B3GNT5Q9BYG0 378 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 PLA2G2FQ9BZM2 168 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 UBXN6Q9BZV1 441 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 PDCL3Q9H2J4 239 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 TBC1D17Q9HA65 648 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 PNPLA8Q9NP80 782 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 FAM49BQ9NUQ9 324 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 TSPAN16Q9UKR8 245 aa18.16■□□□□ 0.5
CTSB-229ENST00000533572 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.16■□□□□ 0.5
CTSB-229ENST00000533572 KRBA1A5PL33 1030 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 SERPING1P05155 500 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 PNMA6AP0CW24 399 aaPredicted RBP18.15■□□□□ 0.5
CTSB-229ENST00000533572 GDI1P31150 447 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 AVPR1AP37288 418 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 CDR2Q01850 454 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 KLHL30Q0D2K2 578 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 MLF2Q15773 248 aaPredicted RBP18.15■□□□□ 0.5
CTSB-229ENST00000533572 POTEHQ6S545 545 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 VITQ6UXI7 678 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 DENND5BQ6ZUT9 1274 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 IRF2BP2Q7Z5L9 587 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 DNASE1L2Q92874 299 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 IRF7Q92985 503 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 C8orf48Q96LL4 319 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 LHX5Q9H2C1 402 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 DMAP1Q9NPF5 467 aaPredicted RBP18.15■□□□□ 0.5
CTSB-229ENST00000533572 ABHD10Q9NUJ1 306 aa18.15■□□□□ 0.5
CTSB-229ENST00000533572 F8VP50 259 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 ZNF263O14978 683 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 AP1G2O75843 785 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 F11P03951 625 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 CCDC130P13994 396 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 NPR3P17342 541 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 AOC1P19801 751 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 BRD2P25440 801 aaKnown RBP18.14■□□□□ 0.49
CTSB-229ENST00000533572 ADORA2BP29275 332 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 NUBP1P53384 320 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 SNX16P57768 344 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 ARID5AQ03989 594 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 PRKCQQ04759 706 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 BST2Q10589 180 aaKnown RBP18.14■□□□□ 0.49
CTSB-229ENST00000533572 GOLGA7BQ2TAP0 167 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 SLC44A4Q53GD3 710 aa18.14■□□□□ 0.49
CTSB-229ENST00000533572 CWF19L1Q69YN2 538 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms