RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CSGALNACT1Q8TDX6 532 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 OSCP1Q8WVF1 389 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CNOT6LQ96LI5 555 aaKnown RBP10.4□□□□□ -0.74
NUP98-220ENST00000533346 HEXIM2Q96MH2 286 aaKnown RBP10.4□□□□□ -0.74
NUP98-220ENST00000533346 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 RNF38Q9H0F5 515 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 TLR8Q9NR97 1041 aaKnown RBP10.4□□□□□ -0.74
NUP98-220ENST00000533346 CLIC5Q9NZA1 410 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 CCL26Q9Y258 94 aa10.4□□□□□ -0.74
NUP98-220ENST00000533346 COL4A3Q01955 1670 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 PROB1E7EW31 1015 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 CKMP06732 381 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 CHRNB1P11230 501 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 TARSP26639 723 aaKnown RBP10.39□□□□□ -0.75
NUP98-220ENST00000533346 PLA2G4AP47712 749 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 RPL34P49207 117 aaKnown RBP10.39□□□□□ -0.75
NUP98-220ENST00000533346 AMPD2Q01433 879 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 ORC1Q13415 861 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 CNGA2Q16280 664 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 MAN2A1Q16706 1144 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 ITPRIPL2Q3MIP1 535 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 SGO2Q562F6 1265 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 HECTD3Q5T447 861 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 LCLAT1Q6UWP7 414 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 RIN3Q8TB24 985 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 FAM3CQ92520 227 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 FBXO32Q969P5 355 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 OTUB2Q96DC9 234 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 GKN1Q9NS71 199 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 FAM49BQ9NUQ9 324 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 PIAS3Q9Y6X2 628 aa10.39□□□□□ -0.75
NUP98-220ENST00000533346 F5P12259 2224 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 KIAA1549LQ6ZVL6 1849 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 FAM170BA6NMN3 283 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 RNF225M0QZC1 329 aaPredicted RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 O00370 1275 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 SLC9A3R1O14745 358 aaPredicted RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 XPO1O14980 1071 aaKnown RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 CLSTN1O94985 981 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 ADORA2BP29275 332 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 CTHP32929 405 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 BCAT1P54687 386 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 EML3Q32P44 896 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 ZNF528Q3MIS6 628 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 ZNF394Q53GI3 561 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 MIIPQ5JXC2 388 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 DGKKQ5KSL6 1271 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 DPY19L2P1Q6NXN4 242 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 TRIM65Q6PJ69 517 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 GBP6Q6ZN66 633 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 PIGZQ86VD9 579 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 TTC30AQ86WT1 665 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 ADGRG2Q8IZP9 1017 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 PPM1KQ8N3J5 372 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 SH3RF2Q8TEC5 729 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 SLC35F5Q8WV83 523 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 NELL1Q92832 810 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 CHFRQ96EP1 664 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 KREMEN1Q96MU8 473 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 CHRDQ9H2X0 955 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 GTSE1Q9NYZ3 720 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 TBC1D14Q9P2M4 693 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 CHORDC1Q9UHD1 332 aaPredicted RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 TSPAN16Q9UKR8 245 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 FBXO4Q9UKT5 387 aa10.38□□□□□ -0.75
NUP98-220ENST00000533346 MTF2Q9Y483 593 aaPredicted RBP10.38□□□□□ -0.75
NUP98-220ENST00000533346 A0A0A0MRY4 1105 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 LRRC10BA6NIK2 292 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 LEFTY2O00292 366 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 COCHO43405 550 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 PAPSS2O95340 614 aaPredicted RBP10.37□□□□□ -0.75
NUP98-220ENST00000533346 SETSIPP0DME0 302 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 PON1P27169 355 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 SLC8A3P57103 927 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 BST2Q10589 180 aaKnown RBP10.37□□□□□ -0.75
NUP98-220ENST00000533346 CCINQ13939 588 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 EXOC3L4Q17RC7 722 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 VWA3BQ502W6 1294 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 TMEM196Q5HYL7 178 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 CDKAL1Q5VV42 579 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 TMEM270Q6UE05 265 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 HTR3DQ70Z44 454 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 GPRIN1Q7Z2K8 1008 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 TADA2BQ86TJ2 420 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 C1orf210Q8IVY1 113 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 ARHGEF19Q8IW93 802 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 ARHGAP18Q8N392 663 aa10.37□□□□□ -0.75
NUP98-220ENST00000533346 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms