RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 WDR87Q6ZQQ6 2873 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ANK1P16157 1881 aa8.76□□□□□ -1.01
NEDD8-207ENST00000533242 ZNF638Q14966 1978 aaKnown RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 OR6C75A6NL08 312 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 M0QZQ0 153 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ABLIM1O14639 778 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 RPP40O75818 363 aaKnown RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 OAZ2O95190 189 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 KCNK5O95279 499 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 PLA2G2CQ5R387 149 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 KLHDC7AQ5VTJ3 777 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 HAUS3Q68CZ6 603 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 MPZL3Q6UWV2 235 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 TRIM58Q8NG06 486 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 OSBPL9Q96SU4 736 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 LRRC1Q9BTT6 524 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ADAM21Q9UKJ8 722 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 PACSIN2Q9UNF0 486 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 JRKLQ9Y4A0 524 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 OBSL1O75147 1896 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 MYO16Q9Y6X6 1858 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 FAM170AA1A519 330 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 CCDC169A6NNP5 214 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 CLIC2O15247 247 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 MEFVO15553 781 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 PJA2O43164 708 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ABCB7O75027 752 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ALDH1A3P47895 512 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 NPTX2P47972 431 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 DNA2P51530 1060 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 SLC7A5Q01650 507 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 RAPGEF1Q13905 1077 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ARHGAP15Q53QZ3 475 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 GJB7Q6PEY0 223 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 KBTBD6Q86V97 674 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ZC3H10Q96K80 434 aaKnown RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 MKNK1Q9BUB5 465 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 TARS2Q9BW92 718 aaKnown RBP8.75□□□□□ -1.01
NEDD8-207ENST00000533242 GOLPH3Q9H4A6 298 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 VPS45Q9NRW7 570 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 VPS18Q9P253 973 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 ADAMTS1Q9UHI8 967 aa8.75□□□□□ -1.01
NEDD8-207ENST00000533242 SSU72P8A0A1W2PR75 194 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 EXTL3O43909 919 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ATG13O75143 517 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 LRPAP1P30533 357 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 PEX3P56589 373 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 GPR17Q13304 367 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 MYBPC2Q14324 1141 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 KNOP1Q1ED39 458 aaKnown RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 EDRF1Q3B7T1 1238 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ITPRIPL2Q3MIP1 535 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ZC2HC1CQ53FD0 456 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 STXBP5Q5T5C0 1151 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 GPR158Q5T848 1215 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 SFMBT2Q5VUG0 894 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TAS1R3Q7RTX0 852 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 SPATA4Q8NEY3 305 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 BPIFB1Q8TDL5 484 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 IQCDQ96DY2 449 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 LRRC3BQ96PB8 259 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TCHPQ9BT92 498 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TSGA10Q9BZW7 698 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 KMT5AQ9NQR1 393 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 GTSE1Q9NYZ3 720 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 HSFX1Q9UBD0 423 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 SLC8A2Q9UPR5 921 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 DNM3Q9UQ16 869 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TRAF3IP3Q9Y228 551 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TGFB1I1O43294 461 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TACC1O75410 805 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ERLIN1O75477 346 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 SYF2O95926 243 aaKnown RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 FTCDO95954 541 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 NMT1P30419 496 aaKnown RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 AARSP49588 968 aaKnown RBP eCLIP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 PTK2Q05397 1052 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 DUSP4Q13115 394 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 DMP1Q13316 513 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 CCDC6Q16204 474 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 SLC10A6Q3KNW5 377 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 RINT1Q6NUQ1 792 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 IRF2BP2Q7Z5L9 587 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 DNAJB7Q7Z6W7 309 aaPredicted RBP8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ITIH5Q86UX2 942 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 PSMG2Q969U7 264 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ZFYVE19Q96K21 471 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 PGLYRP2Q96PD5 576 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 FIZ1Q96SL8 496 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 CRISPLD1Q9H336 500 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 ATXN3LQ9H3M9 355 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 TASP1Q9H6P5 420 aa8.74□□□□□ -1.01
NEDD8-207ENST00000533242 PLEKHA5Q9HAU0 1116 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms