RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CPQQ9Y646 472 aa32.05■■■□□ 2.72
SSSCA1-207ENST00000533115 R4GN57 208 aa32.05■■■□□ 2.72
SSSCA1-207ENST00000533115 FMO5P49326 533 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 STX17P56962 302 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 AMPD2Q01433 879 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 EML3Q32P44 896 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 ZC3H14Q6PJT7 736 aaKnown RBP32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 ASCL5Q7RTU5 278 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 CPA6Q8N4T0 437 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 ATP2A3Q93084 1043 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 HEXIM2Q96MH2 286 aaKnown RBP32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 ECT2Q9H8V3 914 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 PRMT8Q9NR22 394 aaPredicted RBP32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 GMIPQ9P107 970 aa32.04■■■□□ 2.72
SSSCA1-207ENST00000533115 PRR23AA6NEV1 266 aa32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 ZDHHC11BP0C7U3 371 aa32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 PPP1R26Q5T8A7 1209 aaPredicted RBP32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 SLC4A11Q8NBS3 891 aa32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 CHFRQ96EP1 664 aa32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 TMEM176AQ96HP8 235 aa32.03■■■□□ 2.72
SSSCA1-207ENST00000533115 HHLA1C9JL84 531 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 MBL2P11226 248 aaPredicted RBP32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 RAD23BP54727 409 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 CUL2Q13617 745 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 CCINQ13939 588 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 HECTD3Q5T447 861 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 KIAA1958Q8N8K9 716 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 LINC00597Q9H2U6 94 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 PNPLA8Q9NP80 782 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 SMPD4Q9NXE4 827 aa32.02■■■□□ 2.72
SSSCA1-207ENST00000533115 PMM2O15305 246 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 COCHO43405 550 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 TUBP50607 506 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 GAS6Q14393 721 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 GPRIN1Q7Z2K8 1008 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 JAKMIP2Q96AA8 810 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 DUSP16Q9BY84 665 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 SEMA4AQ9H3S1 761 aa32.01■■■□□ 2.71
SSSCA1-207ENST00000533115 TRDMT1O14717 391 aaKnown RBP32■■■□□ 2.71
SSSCA1-207ENST00000533115 GNA14O95837 355 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 GJA4P35212 333 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 CCR3P51677 355 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 TMEM196Q5HYL7 178 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 TSSK4Q6SA08 328 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 DDX42Q86XP3 938 aaKnown RBP eCLIP32■■■□□ 2.71
SSSCA1-207ENST00000533115 SYNPOQ8N3V7 929 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 SPEM1Q8N4L4 309 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 CCSER2Q9H7U1 834 aa32■■■□□ 2.71
SSSCA1-207ENST00000533115 FANCMQ8IYD8 2048 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 GRSF1Q12849 480 aaKnown RBP eCLIP31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 LRMPQ12912 555 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 NR1H3Q13133 447 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 Q6ZS52 159 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 SRRTQ9BXP5 876 aaKnown RBP31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 TLR8Q9NR97 1041 aaKnown RBP31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 CFAP97Q9P2B7 532 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 SCML2Q9UQR0 700 aa31.99■■■□□ 2.71
SSSCA1-207ENST00000533115 NFATC1O95644 943 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 ACO1P21399 889 aaKnown RBP31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 PGFP49763 221 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 YWHAEP62258 255 aaKnown RBP31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 PPP2R5DQ14738 602 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 ARHGAP17Q68EM7 881 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 FSTL4Q6MZW2 842 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 NELL1Q92832 810 aa31.98■■■□□ 2.71
SSSCA1-207ENST00000533115 P4HA2O15460 535 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 TBXAS1P24557 533 aaPredicted RBP31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 CXCL12P48061 93 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 GALK1P51570 392 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 MARSP56192 900 aaKnown RBP31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 CETN1Q12798 172 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 TRIM59Q8IWR1 403 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 EXOC4Q96A65 974 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 ZFRQ96KR1 1074 aaKnown RBP31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 P2RY13Q9BPV8 354 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 ZSCAN32Q9NX65 697 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 PCDHGA2Q9Y5H1 932 aa31.97■■■□□ 2.71
SSSCA1-207ENST00000533115 SLC9A3R1O14745 358 aaPredicted RBP31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 FGFR1OPO95684 399 aaKnown RBP31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 TDGF1P13385 188 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 KIF11P52732 1056 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 SATB1Q01826 763 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 NT5C1BQ96P26 610 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 FAM126AQ9BYI3 521 aaPredicted RBP31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 CLSTN2Q9H4D0 955 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 FBRSL1Q9HCM7 1045 aaKnown RBP31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 RWDD2AQ9UIY3 292 aa31.96■■■□□ 2.71
SSSCA1-207ENST00000533115 MYO16Q9Y6X6 1858 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 CYP26A1O43174 497 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 TLR5O60602 858 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 NAIF1Q69YI7 327 aaPredicted RBP31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 ADGRG2Q8IZP9 1017 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 UBR7Q8N806 425 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 ZBTB44Q8NCP5 570 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 ATRIPQ8WXE1 791 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 NACA2Q9H009 215 aa31.95■■■□□ 2.71
SSSCA1-207ENST00000533115 LMNAP02545 664 aaKnown RBP31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 CCDC192P0DO97 292 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 DRD1P21728 446 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 KCNH2Q12809 1159 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms