RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 SUN2Q9UH99 717 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SAC3D1A6NKF1 404 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 IL12AP29459 219 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 GRIK1P39086 918 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 CENPAP49450 140 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 DNAJC3Q13217 504 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 COG2Q14746 738 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 RBBP7Q16576 425 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SH3D19Q5HYK7 790 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ARHGAP17Q68EM7 881 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 PADI6Q6TGC4 694 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SIRT2Q8IXJ6 389 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 NSUN7Q8NE18 718 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TAMM41Q96BW9 452 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 C19orf60Q96EN9 201 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 YME1L1Q96TA2 773 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 POLR3FQ9H1D9 316 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ARHGEF3Q9NR81 526 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ASNSD1Q9NWL6 643 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SCN3BQ9NY72 215 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 GTSE1Q9NYZ3 720 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 MID2Q9UJV3 735 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 PHTF1Q9UMS5 762 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SYNPO2Q9UMS6 1093 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 MRPS7Q9Y2R9 242 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 UBA6A0AVT1 1052 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 DFFAO00273 331 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZBTB5O15062 677 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF862O60290 1169 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TMCC2O75069 709 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ALBP02768 609 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 CTSHP09668 335 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 GJA9P57773 515 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 GFPT1Q06210 699 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 AP3B2Q13367 1082 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF846Q147U1 533 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 NCAPHQ15003 741 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TAF1CQ15572 869 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 CYFIP1Q7L576 1253 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 MCPH1Q8NEM0 835 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 FERD3LQ96RJ6 166 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF717Q9BY31 904 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 FAM217BQ9NTX9 383 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ADAM22Q9P0K1 906 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TRIM10Q9UDY6 481 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 AMACRQ9UHK6 382 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TRMT6Q9UJA5 497 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SNX12Q9UMY4 172 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 MROH7Q68CQ1 1323 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L15C9J2P7 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L13C9JLJ4 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L11C9JVI0 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L18D6R9N7 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L22D6RA61 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L17D6RBQ6 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L19D6RCP7 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L20D6RJB6 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TJP3O95049 919 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 RALAP11233 206 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 STIP1P31948 543 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 NPTX2P47972 431 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 BNC1Q01954 994 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 POU5F1BQ06416 359 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L24Q0WX57 530 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 KCNMA1Q12791 1236 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ITGA9Q13797 1035 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 KNOP1Q1ED39 458 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 EDRF1Q3B7T1 1238 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 USP17L6PQ6QN14 398 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ATG9AQ7Z3C6 839 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 PIAS4Q8N2W9 510 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 BPIFA3Q9BQP9 254 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 OSBPL6Q9BZF3 934 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 RBM12Q9NTZ6 932 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 EXTL3O43909 919 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TRIM13O60858 407 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SERPIND1P05546 499 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SRGNP10124 158 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 SKIV2L2P42285 1042 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZNF284Q2VY69 593 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 PPP1R36Q96LQ0 422 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 VPS33BQ9H267 617 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 CASS4Q9NQ75 786 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 NMRK1Q9NWW6 199 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 HEY2Q9UBP5 337 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ANAPC7Q9UJX3 599 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 NUP50Q9UKX7 468 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 TMEM5Q9Y2B1 443 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 ZDHHC9Q9Y397 364 aa7.2□□□□□ -1.26
TGFBR3-210ENST00000533089 FAM47DPA6NHR8 397 aa7.19□□□□□ -1.26
TGFBR3-210ENST00000533089 A8MXQ7 604 aa7.19□□□□□ -1.26
TGFBR3-210ENST00000533089 MAP2K7O14733 419 aa7.19□□□□□ -1.26
TGFBR3-210ENST00000533089 GAS2O43903 313 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms