RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CISHQ9NSE2 258 aa17.62■□□□□ 0.41
PKP3-209ENST00000533069 DUS2Q9NX74 493 aaKnown RBP17.62■□□□□ 0.41
PKP3-209ENST00000533069 PTPRDP23468 1912 aa17.62■□□□□ 0.41
PKP3-209ENST00000533069 FMO5P49326 533 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 MAP3K7CLP57077 242 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 CETN1Q12798 172 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 MTAPQ13126 283 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 TRIM68Q6AZZ1 485 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 TXNDC11Q6PKC3 985 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 CLEC20AQ6ZU45 233 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 MAML2Q8IZL2 1156 aaPredicted RBP17.61■□□□□ 0.41
PKP3-209ENST00000533069 EXOC4Q96A65 974 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 FUCA2Q9BTY2 467 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
PKP3-209ENST00000533069 PRMT8Q9NR22 394 aaPredicted RBP17.61■□□□□ 0.41
PKP3-209ENST00000533069 TICRRQ7Z2Z1 1910 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 LEFTY2O00292 366 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 P4HA2O15460 535 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 GFRA3O60609 400 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 BEST1O76090 585 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
PKP3-209ENST00000533069 ZDHHC11BP0C7U3 371 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
PKP3-209ENST00000533069 CUL2Q13617 745 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 PPP2R5DQ14738 602 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 HECTD3Q5T447 861 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 SYNPOQ8N3V7 929 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 TTC16Q8NEE8 873 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 TATDN2Q93075 761 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 NKD2Q969F2 451 aaPredicted RBP17.6■□□□□ 0.41
PKP3-209ENST00000533069 TMEM176AQ96HP8 235 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 HEXIM2Q96MH2 286 aaKnown RBP17.6■□□□□ 0.41
PKP3-209ENST00000533069 ARID3AQ99856 593 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 CPQQ9Y646 472 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 WNT6Q9Y6F9 365 aa17.6■□□□□ 0.41
PKP3-209ENST00000533069 KIF26AQ9ULI4 1882 aaPredicted RBP17.6■□□□□ 0.41
PKP3-209ENST00000533069 OBSL1O75147 1896 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 NFATC1O95644 943 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 ARSAP15289 507 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 CCR3P51677 355 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 MARSP56192 900 aaKnown RBP17.59■□□□□ 0.41
PKP3-209ENST00000533069 NR1H3Q13133 447 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 PON2Q15165 354 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 EML3Q32P44 896 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 ZNF394Q53GI3 561 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 SLC4A11Q8NBS3 891 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 DUSP16Q9BY84 665 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 FAM126AQ9BYI3 521 aaPredicted RBP17.59■□□□□ 0.41
PKP3-209ENST00000533069 RNF38Q9H0F5 515 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 ECT2Q9H8V3 914 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 GMIPQ9P107 970 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 RWDD2AQ9UIY3 292 aa17.59■□□□□ 0.41
PKP3-209ENST00000533069 OTOL1A6NHN0 477 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 HHLA1C9JL84 531 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 SLC9A3R1O14745 358 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 COCHO43405 550 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 MBL2P11226 248 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 ERCC5P28715 1186 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 RAD23BP54727 409 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 STX17P56962 302 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 SLC8A3P57103 927 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 CSTF1Q05048 431 aaKnown RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 GRSF1Q12849 480 aaKnown RBP eCLIP17.58■□□□□ 0.4
PKP3-209ENST00000533069 CCINQ13939 588 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 TMEM196Q5HYL7 178 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 ARHGAP17Q68EM7 881 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 TRIM59Q8IWR1 403 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 SPEM1Q8N4L4 309 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 BPIFA3Q9BQP9 254 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 TLR8Q9NR97 1041 aaKnown RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 CHORDC1Q9UHD1 332 aaPredicted RBP17.58■□□□□ 0.4
PKP3-209ENST00000533069 SCML2Q9UQR0 700 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 PCDHGA2Q9Y5H1 932 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 MIA3Q5JRA6 1907 aa17.58■□□□□ 0.4
PKP3-209ENST00000533069 PRR23AA6NEV1 266 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 ACO1P21399 889 aaKnown RBP17.57■□□□□ 0.4
PKP3-209ENST00000533069 GJA4P35212 333 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 ZXDBP98169 803 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 GPRIN1Q7Z2K8 1008 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 NT5C1BQ96P26 610 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
PKP3-209ENST00000533069 UBXN6Q9BZV1 441 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 NACA2Q9H009 215 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 SMPD4Q9NXE4 827 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 CFAP97Q9P2B7 532 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 GREB1Q4ZG55 1949 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 DENND4CQ5VZ89 1909 aa17.57■□□□□ 0.4
PKP3-209ENST00000533069 E2F8A0AVK6 867 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 AFPP02771 609 aaKnown RBP17.56■□□□□ 0.4
PKP3-209ENST00000533069 DRD1P21728 446 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 PSEN1P49768 467 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 KIF11P52732 1056 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 UBR7Q8N806 425 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 NELL1Q92832 810 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 JAKMIP2Q96AA8 810 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 CHFRQ96EP1 664 aa17.56■□□□□ 0.4
PKP3-209ENST00000533069 P2RY13Q9BPV8 354 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms