RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DDX6P26196 483 aaKnown RBP eCLIP11.83□□□□□ -0.523e-7■□□□□ 9.5
TRAPPC4-211ENST00000533012 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 TBX2Q13207 712 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PDCLQ13371 301 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 TEAD2Q15562 447 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLC5A9Q2M3M2 681 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PM20D1Q6GTS8 502 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 GPRIN1Q7Z2K8 1008 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 TMEM110Q86TL2 294 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 CNGA4Q8IV77 575 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARHGAP18Q8N392 663 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SHKBP1Q8TBC3 707 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 FGF13Q92913 245 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 MCRS1Q96EZ8 462 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 CNGB3Q9NQW8 809 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 GDE1Q9NZC3 331 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 CDH7Q9ULB5 785 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 PIK3R2O00459 728 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 MOSPD3O75425 235 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 FBXO21O94952 628 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 SERPING1P05155 500 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 CEBPBP17676 345 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 HNRNPH3P31942 346 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 RPL34P49207 117 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 PSEN1P49768 467 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 ADKP55263 362 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 FMO1Q01740 532 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 ADIGQ0VDE8 80 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 TDRD12Q587J7 1177 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 GPR158Q5T848 1215 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 SNX30Q5VWJ9 437 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 TMEM150AQ86TG1 271 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 ERICH1Q86X53 443 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 NPAS3Q8IXF0 933 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 MSANTD4Q8NCY6 345 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 C1orf131Q8NDD1 294 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 CPA5Q8WXQ8 436 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 ING5Q8WYH8 240 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 IRGQQ8WZA9 623 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 MYADMQ96S97 322 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 PCDHB18PQ96TA0 734 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 DNAJC7Q99615 494 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 ULBP1Q9BZM6 244 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 MIS12Q9H081 205 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLITRK6Q9H5Y7 841 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 TASP1Q9H6P5 420 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 GMIPQ9P107 970 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 PRKAG3Q9UGI9 489 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 NCANO14594 1321 aa11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-211ENST00000533012 E5RJQ4 531 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 MFAP3LO75121 409 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 GABBR2O75899 941 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 CYP1A1P04798 512 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZDHHC11BP0C7U3 371 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 RALAP11233 206 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 UNGP13051 313 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 LAMP2P13473 410 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 PFKLP17858 780 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 HDCP19113 662 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 SP100P23497 879 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 CDC25BP30305 580 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 NOMO3P69849 1222 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 CYP4F8P98187 520 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 NAA35Q5VZE5 725 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 E4F1Q66K89 784 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 TXNDC8Q6A555 127 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZNF571Q7Z3V5 609 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ADHFE1Q8IWW8 467 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 SCML4Q8N228 414 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 MAB21L3Q8N8X9 362 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 TDRD5Q8NAT2 981 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 GOLGA1Q92805 767 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 C18orf8Q96DM3 657 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZSWIM3Q96MP5 696 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 SLC46A2Q9BY10 475 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 IMPACTQ9P2X3 320 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 CYTH4Q9UIA0 394 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 NAGPAQ9UK23 515 aa11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-211ENST00000533012 TRAV19A0A0A6YYK7 116 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms