RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 WHAMMQ8TF30 809 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 HEXIM2Q96MH2 286 aaKnown RBP18.24■□□□□ 0.51
PHRF1-204ENST00000532550 CEP63Q96MT8 703 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 SMPD4Q9NXE4 827 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 CPQQ9Y646 472 aa18.24■□□□□ 0.51
PHRF1-204ENST00000532550 ATG2BQ96BY7 2078 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 BICDL2A1A5D9 508 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 BIN1O00499 593 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 OLFM2O95897 454 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 GJA4P35212 333 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 GALK1P51570 392 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 ZXDBP98169 803 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 CCINQ13939 588 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 MORC3Q14149 939 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 GAS6Q14393 721 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 CBWD6Q4V339 395 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 TMEM196Q5HYL7 178 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 CBWD3Q5JTY5 395 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 CBWD5Q5RIA9 395 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 SNX30Q5VWJ9 437 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 TATDN2Q93075 761 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 P2RY13Q9BPV8 354 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 CISHQ9NSE2 258 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 COQ4Q9Y3A0 265 aa18.23■□□□□ 0.51
PHRF1-204ENST00000532550 FAM92AA1XBS5 289 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 PPP1R3GB7ZBB8 358 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 SLC9A3R1O14745 358 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-204ENST00000532550 NFATC1O95644 943 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 DRD1P21728 446 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 UBE2HP62256 183 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 SATB1Q01826 763 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 CCDC40Q4G0X9 1142 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 DDX42Q86XP3 938 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHRF1-204ENST00000532550 KIAA1958Q8N8K9 716 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 ZBTB44Q8NCP5 570 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 NELFBQ8WX92 580 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 NELL1Q92832 810 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 TMEM176AQ96HP8 235 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 NACA2Q9H009 215 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 FAM124BQ9H5Z6 455 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-204ENST00000532550 TLR8Q9NR97 1041 aaKnown RBP18.22■□□□□ 0.51
PHRF1-204ENST00000532550 GMIPQ9P107 970 aa18.22■□□□□ 0.51
PHRF1-204ENST00000532550 EP300Q09472 2414 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-204ENST00000532550 COCHO43405 550 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 ATG13O75143 517 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 ZDHHC11BP0C7U3 371 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 BMP6P22004 513 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 TUBP50607 506 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 PPP1R26Q5T8A7 1209 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-204ENST00000532550 FSTL4Q6MZW2 842 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 Q6ZS52 159 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 ADGRG2Q8IZP9 1017 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 SLC35C1Q96A29 364 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 JAKMIP2Q96AA8 810 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
PHRF1-204ENST00000532550 DUSP16Q9BY84 665 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 CFAP97Q9P2B7 532 aa18.21■□□□□ 0.51
PHRF1-204ENST00000532550 HELZP42694 1942 aaKnown RBP18.21■□□□□ 0.51
PHRF1-204ENST00000532550 ACO1P21399 889 aaKnown RBP18.2■□□□□ 0.5
PHRF1-204ENST00000532550 YWHAEP62258 255 aaKnown RBP18.2■□□□□ 0.5
PHRF1-204ENST00000532550 CETN1Q12798 172 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 TTI2Q6NXR4 508 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 FOXR2Q6PJQ5 311 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 CD101Q93033 1021 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 CHFRQ96EP1 664 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 CCSER2Q9H7U1 834 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 FBRSL1Q9HCM7 1045 aaKnown RBP18.2■□□□□ 0.5
PHRF1-204ENST00000532550 PNPLA8Q9NP80 782 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 TBC1D14Q9P2M4 693 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 CTNND2Q9UQB3 1225 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 SCML2Q9UQR0 700 aa18.2■□□□□ 0.5
PHRF1-204ENST00000532550 HHLA1C9JL84 531 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 EGFP01133 1207 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 TDGF1P13385 188 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
PHRF1-204ENST00000532550 FMO5P49326 533 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 RAD23BP54727 409 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 STX17P56962 302 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 LRMPQ12912 555 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 CUL2Q13617 745 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 CAMK4Q16566 473 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 FBXO43Q4G163 708 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 TRIML1Q8N9V2 468 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 SLC4A11Q8NBS3 891 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 ARID3AQ99856 593 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 HINFPQ9BQA5 517 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 SH3BP1Q9Y3L3 701 aa18.19■□□□□ 0.5
PHRF1-204ENST00000532550 E2F8A0AVK6 867 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 TLR5O60602 858 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 LILRB5O75023 590 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 PAPSS2O95340 614 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-204ENST00000532550 GNA14O95837 355 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 TBXAS1P24557 533 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-204ENST00000532550 ATP5C1P36542 298 aaKnown RBP18.18■□□□□ 0.5
PHRF1-204ENST00000532550 SLC8A3P57103 927 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 PAK1Q13153 545 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 GPRIN1Q7Z2K8 1008 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 SUMF1Q8NBK3 374 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 SRRTQ9BXP5 876 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms