RNA–Protein interactions for RNA: ENST00000532194.2

ABCA7-216, Transcript of ATP binding cassette subfamily A member 7, human

TSL 3

Gene ABCA7, Length 1,151 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-216	ENST00000532194	PSAPL1	Q6NUJ1	521 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	ETFBKMT	Q8IXQ9	262 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	FRMD1	Q8N878	549 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	TXNDC5	Q8NBS9	432 aa	Known RBP	13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	SCAMP5	Q8TAC9	235 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	SLITRK1	Q96PX8	696 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	PNKP	Q96T60	521 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	LRRC27	Q9C0I9	530 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	BLZF1	Q9H2G9	400 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	VRTN	Q9H8Y1	702 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	EHD2	Q9NZN4	543 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	NXF1	Q9UBU9	619 aa	Known RBP	13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	MBD1	Q9UIS9	605 aa	Predicted RBP	13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	HCN2	Q9UL51	889 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	WASF3	Q9UPY6	502 aa		13.61	□□□□□ -0.23
ABCA7-216	ENST00000532194	ASCC3	Q8N3C0	2202 aa	Known RBP	13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	FAM92A	A1XBS5	289 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194		A8MXQ7	604 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194		K7ELQ4	463 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	SLC9A3R1	O14745	358 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	CUTA	O60888	179 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	VNN1	O95497	513 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	ABL1	P00519	1130 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	ZDHHC11B	P0C7U3	371 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	MBL2	P11226	248 aa	Predicted RBP	13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	ADH5	P11766	374 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	YWHAQ	P27348	245 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	TIE1	P35590	1138 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	P2RY2	P41231	377 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	SNRPF	P62306	86 aa	Known RBP	13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	CLDN10	P78369	228 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	AMPD3	Q01432	767 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	CUL4B	Q13620	913 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	LY6G5C	Q5SRR4	150 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	SNX30	Q5VWJ9	437 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	FAM35A	Q86V20	835 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	FUK	Q8N0W3	1084 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	NUP93	Q8N1F7	819 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	IQUB	Q8NA54	791 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	ZMIZ2	Q8NF64	920 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	CCDC26	Q8TAB7	109 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	RLN3	Q8WXF3	142 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	FBXO32	Q969P5	355 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	CCSER2	Q9H7U1	834 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	SLC39A2	Q9NP94	309 aa		13.6	□□□□□ -0.23
ABCA7-216	ENST00000532194	E2F8	A0AVK6	867 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	POLR2D	O15514	142 aa	Known RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	KLRC4	O43908	158 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	ADH1C	P00326	375 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	C4BPA	P04003	597 aa	Known RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	CENPB	P07199	599 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	ATIC	P31939	592 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	NOVA1	P51513	510 aa	Known RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	SLC5A3	P53794	718 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	IRX4	P78413	519 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	MAP7D1	Q3KQU3	841 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	CYP2U1	Q7Z449	544 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	C11orf74	Q86VG3	221 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	BBS7	Q8IWZ6	715 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	GRAMD1C	Q8IYS0	662 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	PARD3B	Q8TEW8	1205 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	OVCA2	Q8WZ82	227 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	CHAMP1	Q96JM3	812 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	MAGEF1	Q9HAY2	307 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	ARHGEF4	Q9NR80	690 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	DMAC2	Q9NW81	257 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	GMIP	Q9P107	970 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	HMGXB4	Q9UGU5	601 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	IGF2R	P11717	2491 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	GON4L	Q3T8J9	2241 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	ASPM	Q8IZT6	3477 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	ZZEF1	O43149	2961 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	AKAP13	Q12802	2813 aa		13.59	□□□□□ -0.23
ABCA7-216	ENST00000532194	PI4KA	P42356	2102 aa		13.58	□□□□□ -0.23
ABCA7-216	ENST00000532194	TRIM24	O15164	1050 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	HOXC11	O43248	304 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	GREM1	O60565	184 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	BEST1	O76090	585 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	RTN3	O95197	1032 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	APOD	P05090	189 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	GRIA2	P42262	883 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	PTGER3	P43115	390 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	DHPS	P49366	369 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	DLG4	P78352	724 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	ORC1	Q13415	861 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	TRPC3	Q13507	836 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	KNOP1	Q1ED39	458 aa	Known RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	ZNF699	Q32M78	642 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	HSF5	Q4G112	596 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	SCARA5	Q6ZMJ2	495 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	TTC30A	Q86WT1	665 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	KIAA0895	Q8NCT3	520 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	PDZD8	Q8NEN9	1154 aa		13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	SYAP1	Q96A49	352 aa	Predicted RBP	13.58	□□□□□ -0.24
ABCA7-216	ENST00000532194	ZNF396	Q96N95	335 aa	Predicted RBP	13.58	□□□□□ -0.24

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