RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 ELOVL4Q9GZR5 314 aa22.34■■□□□ 1.17
FDFT1-220ENST00000531733 SMYD3Q9H7B4 428 aa22.34■■□□□ 1.17
FDFT1-220ENST00000531733 CHORDC1Q9UHD1 332 aaPredicted RBP22.34■■□□□ 1.17
FDFT1-220ENST00000531733 WASF3Q9UPY6 502 aa22.34■■□□□ 1.17
FDFT1-220ENST00000531733 WDFY3Q8IZQ1 3526 aa22.34■■□□□ 1.17
FDFT1-220ENST00000531733 SPEGQ15772 3267 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 C1QTNF9BB2RNN3 333 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 KHNYNO15037 678 aaKnown RBP22.33■■□□□ 1.17
FDFT1-220ENST00000531733 SPTLC2O15270 562 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 COCHO43405 550 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 STX6O43752 255 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 C1QTNF9P0C862 333 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 ADH5P11766 374 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 P2RY2P41231 377 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 PGFP49763 221 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 LY6G5CQ5SRR4 150 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 CNNM4Q6P4Q7 775 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 TMEFF1Q8IYR6 380 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 XXYLT1Q8NBI6 393 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 SLITRK1Q96PX8 696 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 BLZF1Q9H2G9 400 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 ZSCAN16Q9H4T2 348 aaPredicted RBP22.33■■□□□ 1.17
FDFT1-220ENST00000531733 CCSER2Q9H7U1 834 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 ARHGEF4Q9NR80 690 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 TMEM74BQ9NUR3 256 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 EHD2Q9NZN4 543 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 HCN2Q9UL51 889 aa22.33■■□□□ 1.17
FDFT1-220ENST00000531733 CIZ1Q9ULV3 898 aaPredicted RBP22.33■■□□□ 1.17
FDFT1-220ENST00000531733 A0A0A0MRY4 1105 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 SLC9A3R1O14745 358 aaPredicted RBP22.32■■□□□ 1.16
FDFT1-220ENST00000531733 APODP05090 189 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 YWHAQP27348 245 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 PTGER3P43115 390 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 ZNF252P-AS1Q0IIN9 211 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 C11orf74Q86VG3 221 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 NUP93Q8N1F7 819 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 KIAA1958Q8N8K9 716 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 NAT16Q8N8M0 369 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 FBXO32Q969P5 355 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 C7orf25Q9BPX7 421 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 SDCBP2Q9H190 292 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 TMEM9BQ9NQ34 198 aa22.32■■□□□ 1.16
FDFT1-220ENST00000531733 MYO18AQ92614 2054 aaKnown RBP22.32■■□□□ 1.16
FDFT1-220ENST00000531733 TNFRSF10BO14763 440 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 TRIM24O15164 1050 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 STAU1O95793 577 aaKnown RBP22.31■■□□□ 1.16
FDFT1-220ENST00000531733 FAM163BP0C2L3 166 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 EIF2DP41214 584 aaKnown RBP22.31■■□□□ 1.16
FDFT1-220ENST00000531733 FOXC1Q12948 553 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 DAB2IPQ5VWQ8 1189 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 FAM35AQ86V20 835 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 ETFBKMTQ8IXQ9 262 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 HMGB4Q8WW32 186 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 INTS4Q96HW7 963 aaKnown RBP22.31■■□□□ 1.16
FDFT1-220ENST00000531733 LRRC27Q9C0I9 530 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 CUEDC2Q9H467 287 aa22.31■■□□□ 1.16
FDFT1-220ENST00000531733 ATXN2Q99700 1313 aaKnown RBP22.31■■□□□ 1.16
FDFT1-220ENST00000531733 GON4LQ3T8J9 2241 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 ASCC3Q8N3C0 2202 aaKnown RBP22.3■■□□□ 1.16
FDFT1-220ENST00000531733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.3■■□□□ 1.16
FDFT1-220ENST00000531733 PPP6R2O75170 966 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 ADH1CP00326 375 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 PROS1P07225 676 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 GRIA2P42262 883 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 TRPC3Q13507 836 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 MAP7D1Q3KQU3 841 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 UAP1L1Q3KQV9 507 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 SCARA5Q6ZMJ2 495 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 UNC13DQ70J99 1090 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 BBS7Q8IWZ6 715 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 SLC39A2Q9NP94 309 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 FSCN3Q9NQT6 498 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 GMIPQ9P107 970 aa22.3■■□□□ 1.16
FDFT1-220ENST00000531733 PLXND1Q9Y4D7 1925 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 TCRBV21S2A2A0A5A6 115 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 E2F8A0AVK6 867 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 BEST1O76090 585 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 ALDH1A2O94788 518 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 SLC5A3P53794 718 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 ORC1Q13415 861 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 TRIM61Q5EBN2 209 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 FOXD4L5Q5VV16 416 aaPredicted RBP22.29■■□□□ 1.16
FDFT1-220ENST00000531733 DDX42Q86XP3 938 aaKnown RBP eCLIP22.29■■□□□ 1.16
FDFT1-220ENST00000531733 MIB1Q86YT6 1006 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 IQUBQ8NA54 791 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 ZMIZ2Q8NF64 920 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 WHAMMQ8TF30 809 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 FOXD4L4Q8WXT5 416 aaPredicted RBP22.29■■□□□ 1.16
FDFT1-220ENST00000531733 TMEM121BQ9BXQ6 578 aaPredicted RBP22.29■■□□□ 1.16
FDFT1-220ENST00000531733 IL37Q9NZH6 218 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 UBE4BO95155 1302 aa22.29■■□□□ 1.16
FDFT1-220ENST00000531733 LRRIQ3A6PVS8 624 aaPredicted RBP22.28■■□□□ 1.16
FDFT1-220ENST00000531733 POLR2DO15514 142 aaKnown RBP22.28■■□□□ 1.16
FDFT1-220ENST00000531733 CUTAO60888 179 aa22.28■■□□□ 1.16
FDFT1-220ENST00000531733 TULP3O75386 442 aa22.28■■□□□ 1.16
FDFT1-220ENST00000531733 RTN3O95197 1032 aaPredicted RBP22.28■■□□□ 1.16
FDFT1-220ENST00000531733 VNN1O95497 513 aa22.28■■□□□ 1.16
FDFT1-220ENST00000531733 ZDHHC11BP0C7U3 371 aa22.28■■□□□ 1.16
FDFT1-220ENST00000531733 ATICP31939 592 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms