RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 OVCA2Q8WZ82 227 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 SUSD6Q92537 303 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 SLITRK1Q96PX8 696 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 IL21Q9HBE4 155 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 WDR6Q9NNW5 1121 aaKnown RBP17.82■□□□□ 0.44
SF3B2-211ENST00000531041 CNGB3Q9NQW8 809 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 ADAMTS1Q9UHI8 967 aa17.82■□□□□ 0.44
SF3B2-211ENST00000531041 E5RJQ4 531 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ZNF197O14709 1029 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ZBED1O96006 694 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 F11P03951 625 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 LCP1P13796 627 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 GABRB2P47870 512 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PPP3CCP48454 512 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 IFRD2Q12894 506 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 TAF10Q12962 218 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 SMAD4Q13485 552 aaKnown RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ASTE1Q2TB18 679 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 LEXMQ3ZCV2 418 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PTPN20Q4JDL3 420 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PRSS36Q5K4E3 855 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PPP1R2P3Q6NXS1 205 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 GAREM2Q75VX8 874 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PDZD4Q76G19 769 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ERICH1Q86X53 443 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 SIX6OS1Q8N1H7 587 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 MSANTD4Q8NCY6 345 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PDZD8Q8NEN9 1154 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 FBXO32Q969P5 355 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 NECTIN4Q96NY8 510 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ULBP1Q9BZM6 244 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 CDH22Q9UJ99 828 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 NCANO14594 1321 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 A0A087X0T9 212 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PIK3R2O00459 728 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 MBTPS2O43462 519 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 FBXO21O94952 628 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 USP17L7P0C7H9 530 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 FAM228BP0C875 321 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 MYL4P12829 197 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 MMP8P22894 467 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 GABRR2P28476 465 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 CDC25CP30307 473 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 CCR2P41597 374 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 NSFP46459 744 aaKnown RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 NTHL1P78549 312 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 ACAD10Q6JQN1 1059 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 TMEM150AQ86TG1 271 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PHF13Q86YI8 300 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 SCUBE3Q8IX30 993 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 IPO4Q8TEX9 1081 aaKnown RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 C18orf8Q96DM3 657 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 PDLIM2Q96JY6 352 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 MIS12Q9H081 205 aa17.81■□□□□ 0.44
SF3B2-211ENST00000531041 NHEJ1Q9H9Q4 299 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 USP15Q9Y4E8 981 aaPredicted RBP17.81■□□□□ 0.44
SF3B2-211ENST00000531041 C5orf42Q9H799 3197 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 XIRP2A4UGR9 3374 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 GRXCR2A6NFK2 248 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 PAPSS1O43252 624 aaPredicted RBP17.8■□□□□ 0.44
SF3B2-211ENST00000531041 CLUHO75153 1309 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 TADA3O75528 432 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 COL6A3P12111 3177 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 DAOAP59103 153 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 CBX2Q14781 532 aaPredicted RBP17.8■□□□□ 0.44
SF3B2-211ENST00000531041 SLC5A9Q2M3M2 681 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 MON1AQ86VX9 555 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 IRGQQ8WZA9 623 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 VCPIP1Q96JH7 1222 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 CCDC42Q96M95 316 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 DEF6Q9H4E7 631 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 SYNCQ9H7C4 482 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 TLR8Q9NR97 1041 aaKnown RBP17.8■□□□□ 0.44
SF3B2-211ENST00000531041 TAS2R14Q9NYV8 317 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 TRPM5Q9NZQ8 1165 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 TJP2Q9UDY2 1190 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 CHORDC1Q9UHD1 332 aaPredicted RBP17.8■□□□□ 0.44
SF3B2-211ENST00000531041 NAGPAQ9UK23 515 aa17.8■□□□□ 0.44
SF3B2-211ENST00000531041 A0A1W2PRU2 124 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 SART1O43290 800 aaKnown RBP17.79■□□□□ 0.44
SF3B2-211ENST00000531041 RTN2O75298 545 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 MOSPD3O75425 235 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 ERBB2P04626 1255 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 ZDHHC11BP0C7U3 371 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 FSHRP23945 695 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 PSEN1P49768 467 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 MRPS5P82675 430 aaKnown RBP17.79■□□□□ 0.44
SF3B2-211ENST00000531041 PTP4A2Q12974 167 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 SLC18A3Q16572 532 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 PUS10Q3MIT2 529 aaKnown RBP17.79■□□□□ 0.44
SF3B2-211ENST00000531041 BHLHA9Q7RTU4 235 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 ZDHHC17Q8IUH5 632 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-211ENST00000531041 SHKBP1Q8TBC3 707 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 TCEAL4Q96EI5 215 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 GCNAQ96QF7 691 aa17.79■□□□□ 0.44
SF3B2-211ENST00000531041 ISCUQ9H1K1 167 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms