RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OLFML1Q6UWY5 402 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 UNC93AQ86WB7 457 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 TMEM130Q8N3G9 435 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 CYTH2Q99418 400 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 PAFAH2Q99487 392 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 PAIP2Q9BPZ3 127 aaKnown RBP17.96■□□□□ 0.47
BRCA2-204ENST00000530893 C10orf88Q9H8K7 445 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 PAK5Q9P286 719 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 MDM4O15151 490 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 CAPN15O75808 1086 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SDC4P31431 198 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 RPA3P35244 121 aaPredicted RBP17.96■□□□□ 0.47
BRCA2-204ENST00000530893 MSH2P43246 934 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 CCDC14Q49A88 953 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 DUSP28Q4G0W2 176 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 C4orf22Q6V702 233 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 FBF1Q8TES7 1133 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 MORF4L1Q9UBU8 362 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
BRCA2-204ENST00000530893 TM9SF1O15321 606 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 TOMM70O94826 608 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 SNAI1O95863 264 aaPredicted RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 MMP3P08254 477 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 KRT4P19013 534 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 YARSP54577 528 aaKnown RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 ELF3P78545 371 aaPredicted RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 GAD2Q05329 585 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 SF3A3Q12874 501 aaKnown RBP eCLIP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 MMRN1Q13201 1228 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 KCNJ11Q14654 390 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 DGKDQ16760 1214 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 C15orf59Q2T9L4 293 aaPredicted RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 BBS9Q3SYG4 887 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 PPP1R26Q5T8A7 1209 aaPredicted RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 SH3PXD2AQ5TCZ1 1133 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 SLC27A1Q6PCB7 646 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 C4orf33Q8N1A6 199 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 LRRC8CQ8TDW0 803 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 SLC35F5Q8WV83 523 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 WDR83Q9BRX9 315 aaKnown RBP17.95■□□□□ 0.46
BRCA2-204ENST00000530893 ZNF670Q9BS34 389 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 KIF9Q9HAQ2 790 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 PHTF1Q9UMS5 762 aa17.95■□□□□ 0.46
BRCA2-204ENST00000530893 TCRBV7S3A2A0A539 114 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 BANF1O75531 89 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 SCNN1AP37088 669 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 RIPK1Q13546 671 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ZBTB6Q15916 424 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 HHATQ5VTY9 493 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ARHGAP17Q68EM7 881 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 SLC9A4Q6AI14 798 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 PMF1Q6P1K2 205 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ARCQ7LC44 396 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 FITM2Q8N6M3 262 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 PLD5Q8N7P1 536 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 C12orf29Q8N999 325 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 BEST2Q8NFU1 509 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 SNX27Q96L92 541 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 GCOM2Q9BZD3 368 aaPredicted RBP17.94■□□□□ 0.46
BRCA2-204ENST00000530893 A0A1W2PPM1 405 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 BCLAF3A2AJT9 711 aaKnown RBP17.94■□□□□ 0.46
BRCA2-204ENST00000530893 H7C0C1 242 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 PDHXO00330 501 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 APOL1O14791 398 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ATP5OP48047 213 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 NCALDP61601 193 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 PDE4CQ08493 712 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ZC3H18Q86VM9 953 aaKnown RBP17.94■□□□□ 0.46
BRCA2-204ENST00000530893 TTC30AQ86WT1 665 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 MZB1Q8WU39 189 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 DCAKDQ8WVC6 231 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 PIWIL1Q96J94 861 aaKnown RBP17.94■□□□□ 0.46
BRCA2-204ENST00000530893 DNAI2Q9GZS0 605 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 ECT2Q9H8V3 914 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 USP29Q9HBJ7 922 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 CYLDQ9NQC7 956 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 SNX9Q9Y5X1 595 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 TEX264Q9Y6I9 313 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 USH1CQ9Y6N9 552 aa17.94■□□□□ 0.46
BRCA2-204ENST00000530893 IQANK1A0A1B0GTG1 560 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 EDF1O60869 148 aaKnown RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ECM2O94769 699 aaPredicted RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 NPTXRO95502 500 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 IL4RP24394 825 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 HOXA11P31270 313 aaPredicted RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 BCAR1P56945 870 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 DNAJC3Q13217 504 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 CDO1Q16878 200 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 FAM172AQ8WUF8 416 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 FAF2Q96CS3 445 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 TSPAN18Q96SJ8 248 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
BRCA2-204ENST00000530893 ADAMTS10Q9H324 1103 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 PCDH18Q9HCL0 1135 aa17.93■□□□□ 0.46
BRCA2-204ENST00000530893 PNPLA8Q9NP80 782 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms