RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 EMC10Q5UCC4 262 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 RNF43Q68DV7 783 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 RHBDF2Q6PJF5 856 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 TMEM92Q6UXU6 159 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 FAM35AQ86V20 835 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 C12orf56Q8IXR9 622 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 ALLCQ8N6M5 410 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 MDGA1Q8NFP4 955 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 CHAMP1Q96JM3 812 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 EDEM2Q9BV94 578 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 CHORDC1Q9UHD1 332 aaPredicted RBP22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 CFAP47Q6ZTR5 3102 aa22.04■■□□□ 1.12
TSPAN4-219ENST00000530404 BCLAF3A2AJT9 711 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 COCHO43405 550 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 KLF8O95600 359 aaPredicted RBP22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 CAVIN2O95810 425 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 FAM163BP0C2L3 166 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 ATICP31939 592 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 ME1P48163 572 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 ORC1Q13415 861 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 USP39Q53GS9 565 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 PAQR9Q6ZVX9 377 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 RASSF3Q86WH2 238 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 TXNDC5Q8NBS9 432 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 ZFRQ96KR1 1074 aaKnown RBP22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 PNKPQ96T60 521 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 FAM13BQ9NYF5 915 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 SERTAD1Q9UHV2 236 aa22.03■■□□□ 1.12
TSPAN4-219ENST00000530404 PVALEFA0A1B0GWK0 134 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 SLC9A3R1O14745 358 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 KLRC4O43908 158 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 VNN1O95497 513 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 F13A1P00488 732 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 APODP05090 189 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 ZSCAN22P10073 491 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 ADH5P11766 374 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 SLC5A3P53794 718 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 CRY1Q16526 586 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 ZNF667Q5HYK9 610 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 RESP18Q5W5W9 173 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 PMS2CLQ68D20 193 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 CCDC26Q8TAB7 109 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 PARD3BQ8TEW8 1205 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 WBP2Q969T9 261 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 CNOT6LQ96LI5 555 aaKnown RBP22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 CCSER2Q9H7U1 834 aa22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 CIZ1Q9ULV3 898 aaPredicted RBP22.02■■□□□ 1.12
TSPAN4-219ENST00000530404 PATE3B3GLJ2 98 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 SGK1O00141 431 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 RTN3O95197 1032 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 KAT7O95251 611 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 C4BPAP04003 597 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 IRF1P10914 325 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 CHRM1P11229 460 aaPredicted RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 DLG4P78352 724 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 MRPS21P82921 87 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 STK4Q13043 487 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 NCOA4Q13772 614 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 PKP1Q13835 747 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 ST3GAL2Q16842 350 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 LY6G5CQ5SRR4 150 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 ACOT1Q86TX2 421 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 NAT16Q8N8M0 369 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 IL17RCQ8NAC3 791 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 KIAA0895Q8NCT3 520 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 RLN3Q8WXF3 142 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 LSM14BQ9BX40 385 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 ARHGEF4Q9NR80 690 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 GMIPQ9P107 970 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 CGNQ9P2M7 1197 aaKnown RBP22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 ATP8B3O60423 1300 aa22.01■■□□□ 1.11
TSPAN4-219ENST00000530404 C4orf47A7E2U8 309 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 TNFRSF10BO14763 440 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 AP1G2O75843 785 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 KCNK5O95279 499 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 CCDC130P13994 396 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 PMLP29590 882 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 DHPSP49366 369 aaPredicted RBP22■■□□□ 1.11
TSPAN4-219ENST00000530404 PGFP49763 221 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 HECTD3Q5T447 861 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 DDX42Q86XP3 938 aaKnown RBP eCLIP22■■□□□ 1.11
TSPAN4-219ENST00000530404 FRMD1Q8N878 549 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 SPRYD3Q8NCJ5 442 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 PDZD8Q8NEN9 1154 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 VRTNQ9H8Y1 702 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22■■□□□ 1.116e-7■■■■■ 76.9
TSPAN4-219ENST00000530404 KRT82Q9NSB4 513 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 HMGXB4Q9UGU5 601 aa22■■□□□ 1.11
TSPAN4-219ENST00000530404 LNP1A1A4G5 178 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 BEST1O76090 585 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 ADH1CP00326 375 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 SPOPLQ6IQ16 392 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 PSAPL1Q6NUJ1 521 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 CYP2U1Q7Z449 544 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 BBS7Q8IWZ6 715 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 CEP57L1Q8IYX8 460 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 FUKQ8N0W3 1084 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 ZMIZ2Q8NF64 920 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 OVCA2Q8WZ82 227 aa21.99■■□□□ 1.11
TSPAN4-219ENST00000530404 SMARCD1Q96GM5 515 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms