RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CTNNA2P26232 953 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 BCAT1P54687 386 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 TSPY1Q01534 308 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 BST2Q10589 180 aaKnown RBP15.14■□□□□ 0.01
TTC39A-216ENST00000530004 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 FAM171BQ6P995 826 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 LRRTM3Q86VH5 581 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 ACTRT1Q8TDG2 376 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 ALG3Q92685 438 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 PKMYT1Q99640 499 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 MIS12Q9H081 205 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 METTL5Q9NRN9 209 aaKnown RBP15.14■□□□□ 0.01
TTC39A-216ENST00000530004 PCDHA3Q9Y5H8 950 aa15.14■□□□□ 0.01
TTC39A-216ENST00000530004 CCDC66A2RUB6 948 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 TEX28O15482 410 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MAN1A1P33908 653 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 OR1D2P34982 312 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 TUBB4BP68371 445 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ROR1Q01973 937 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 FUKQ8N0W3 1084 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 RASGEF1CQ8N431 466 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MCRS1Q96EZ8 462 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 KLHL5Q96PQ7 755 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 HNRNPABQ99729 332 aaKnown RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 LCMT1Q9UIC8 334 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 USTQ9Y2C2 406 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 PGRMC1O00264 195 aaKnown RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 CLDN5O00501 218 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 CPB1P15086 417 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 RFC1P35251 1148 aaPredicted RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 NDUFV1P49821 464 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 PEX5P50542 639 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ARPP19P56211 112 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 OGDHQ02218 1023 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ITIH3Q06033 890 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ZNF252P-AS1Q0IIN9 211 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 GPR17Q13304 367 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ZNF211Q13398 564 aaPredicted RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 GRIN2CQ14957 1233 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 FAM102AQ5T9C2 384 aaPredicted RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 ZNF697Q5TEC3 545 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 FAM183BPQ6ZVS7 135 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 DCP1BQ8IZD4 617 aaKnown RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 JOSD2Q8TAC2 188 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MYCBPAPQ8TBZ2 947 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 STK32AQ8WU08 396 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MRPL38Q96DV4 380 aaKnown RBP15.13■□□□□ 0.01
TTC39A-216ENST00000530004 PCED1BQ96HM7 432 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 MED10Q9BTT4 135 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 EMILIN2Q9BXX0 1053 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 SLC4A5Q9BY07 1137 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 EPC1Q9H2F5 836 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 PRDM12Q9H4Q4 367 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 TMLHEQ9NVH6 421 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 CDH23Q9H251 3354 aa15.13■□□□□ 0.01
TTC39A-216ENST00000530004 CHD7Q9P2D1 2997 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 WDR27A2RRH5 827 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 RAB33AQ14088 237 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 MAPRE1Q15691 268 aaKnown RBP15.12■□□□□ 0.01
TTC39A-216ENST00000530004 SLC39A12Q504Y0 691 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
TTC39A-216ENST00000530004 TMEM110Q86TL2 294 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 CHD9Q3L8U1 2897 aa15.12■□□□□ 0.01
TTC39A-216ENST00000530004 ADH1AP07327 375 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 CDR1P51861 262 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RWDD2BP57060 319 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SLC8A3P57103 927 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SNX16P57768 344 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SMARCB1Q12824 385 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PIGHQ14442 188 aaPredicted RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 NFE2Q16621 373 aaPredicted RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PAQR9Q6ZVX9 377 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 GPR161Q8N6U8 529 aaKnown RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 EMC1Q8N766 993 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 ZNF461Q8TAF7 563 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 DUSP16Q9BY84 665 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 B3GNT5Q9BYG0 378 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 TTC7AQ9ULT0 858 aaPredicted RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 MTMR11A4FU01 709 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 XPO1O14980 1071 aaKnown RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 GABBR2O75899 941 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 ABLIM3O94929 683 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 FGGP02679 453 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RHOXF2BP0C7M4 288 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PYGMP11217 842 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 NPR3P17342 541 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PSMA2P25787 234 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 TAS2R40P59535 323 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SCUBE3Q8IX30 993 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RHOT1Q8IXI2 618 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 NIPA2Q8N8Q9 360 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms