RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 TMED1Q13445 227 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 DPYSL3Q14195 570 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 TAF5Q15542 800 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 TCHHL1Q5QJ38 904 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 FOXR2Q6PJQ5 311 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 PDCD6IPQ8WUM4 868 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 TMEM176AQ96HP8 235 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 EPS15L1Q9UBC2 864 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 SLC24A2Q9UI40 661 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 STAP1Q9ULZ2 295 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 TIMM13Q9Y5L4 95 aaPredicted RBP10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 NR2E3Q9Y5X4 410 aa10.29□□□□□ -0.76
CCDC90B-214ENST00000529689 ZC3H4Q9UPT8 1303 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 KIF13AQ9H1H9 1805 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MYL3P08590 195 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 EEF1B2P24534 225 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MLH1P40692 756 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 RFC5P40937 340 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MED21Q13503 144 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ITGA9Q13797 1035 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 PDCD2Q16342 344 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 BOLA3Q53S33 107 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 FSCBQ5H9T9 825 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ANKRD22Q5VYY1 191 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MPZL3Q6UWV2 235 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 DLK2Q6UY11 383 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 WNK4Q96J92 1243 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SPEF2Q9C093 1822 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SPDYE16A6NNV3 312 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 M0QYT0 321 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 EDIL3O43854 480 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 BNIP3LO60238 219 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ZNF286BP0CG31 522 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 TPI1P60174 286 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 STX1BP61266 288 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 DPY19L2Q6NUT2 758 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 IZUMO2Q6UXV1 221 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 AGBL3Q8NEM8 1001 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ATP6V1E2Q96A05 226 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 CNPY3Q9BT09 278 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 VCX3AQ9NNX9 186 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 TJP2Q9UDY2 1190 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 GRID1Q9ULK0 1009 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MYH7P12883 1935 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 LACTBL1A8MY62 500 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 C19orf81C9J6K1 198 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 KIF3CO14782 793 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 CALB2P22676 271 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 GAD2Q05329 585 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SWT1Q5T5J6 900 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 ACAD11Q709F0 780 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SCUBE1Q8IWY4 988 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 IPMKQ8NFU5 416 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 RDM1Q8NG50 284 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 RNF139Q8WU17 664 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SKA2Q8WVK7 121 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 SERPINI1Q99574 410 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 MROH7Q68CQ1 1323 aa10.28□□□□□ -0.76
CCDC90B-214ENST00000529689 KPNA7A9QM74 516 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 CLGNO14967 610 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 PMPCBO75439 489 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 MICAL2O94851 1124 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 NFICP08651 508 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 INSRRP14616 1297 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 AKAP5P24588 427 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 GTF2A2P52657 109 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 CAPSQ13938 189 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 CNGA3Q16281 694 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 STK32AQ8WU08 396 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 CENPKQ9BS16 269 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 RNPEPL1Q9HAU8 725 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 APOBEC3GQ9HC16 384 aaKnown RBP10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 SARS2Q9NP81 518 aaKnown RBP10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 MAN1C1Q9NR34 630 aa10.27□□□□□ -0.76
CCDC90B-214ENST00000529689 ZMYM2Q9UBW7 1377 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 A0A0B4J269 797 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 RASSF9O75901 435 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 GNAT1P11488 350 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 PMLP29590 882 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 MSX2P35548 267 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 PTDSS1P48651 473 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 NUDT2P50583 147 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 TMEM132BQ14DG7 1078 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 IYDQ6PHW0 289 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 ALYREFQ86V81 257 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 WDR49Q8IV35 697 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms