RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
LTBP3-210ENST00000528516 FAM237BA0A1B0GVD1 139 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 BANF1O75531 89 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CALB1P05937 261 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CASP2P42575 452 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 MYL6P60660 151 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CYP1B1Q16678 543 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 TRMT5Q32P41 509 aaKnown RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CCNYL1Q8N7R7 359 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 NETO2Q8NC67 525 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 ICA1LQ8NDH6 482 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 PFDN4Q9NQP4 134 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 KLHL8Q9P2G9 620 aaPredicted RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 SSTR1P30872 391 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 GMPSP49915 693 aaPredicted RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CNTN2Q02246 1040 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 RPS6KA2Q15349 733 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 C1orf186Q6ZWK4 172 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 NUDCD3Q8IVD9 361 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 PPWD1Q96BP3 646 aaKnown RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 GGA3Q9NZ52 723 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 SLC17A7Q9P2U7 560 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 PPM1HQ9ULR3 514 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 IQANK1A0A1B0GTG1 560 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CXCL9Q07325 125 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CBX3Q13185 183 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 PDE1CQ14123 709 aaPredicted RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 EML3Q32P44 896 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 STKLD1Q8NE28 680 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 PDCD2LQ9BRP1 358 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 MYOZ2Q9NPC6 264 aa18.59■□□□□ 0.57
LTBP3-210ENST00000528516 XPO7Q9UIA9 1087 aaKnown RBP18.59■□□□□ 0.57
LTBP3-210ENST00000528516 CLPTM1O96005 669 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 TPD52P55327 224 aaPredicted RBP18.58■□□□□ 0.57
LTBP3-210ENST00000528516 HIC1Q14526 733 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 TRIM67Q6ZTA4 783 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 TMPRSS6Q8IU80 811 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 NENFQ9UMX5 172 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 ZNF232Q9UNY5 417 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 KAT6AQ92794 2004 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.57
LTBP3-210ENST00000528516 HIRAP54198 1017 aaPredicted RBP18.58■□□□□ 0.57
LTBP3-210ENST00000528516 DACT2Q5SW24 774 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 ARID3BQ8IVW6 561 aaPredicted RBP18.58■□□□□ 0.57
LTBP3-210ENST00000528516 RBM15BQ8NDT2 890 aaKnown RBP18.58■□□□□ 0.57
LTBP3-210ENST00000528516 GRIP2Q9C0E4 1043 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 OLFML3Q9NRN5 406 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 AFG3L2Q9Y4W6 797 aa18.58■□□□□ 0.57
LTBP3-210ENST00000528516 NEMP1O14524 444 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 GPC4O75487 556 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 HOXD13P35453 343 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 RGS2P41220 211 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 ATP11CQ8NB49 1132 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 ZNF280CQ8ND82 737 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 BTBD7Q9P203 1132 aa18.58■□□□□ 0.56
LTBP3-210ENST00000528516 WDR46O15213 610 aaKnown RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 MAGEB2O15479 319 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 PRPF4O43172 522 aaKnown RBP eCLIP18.57■□□□□ 0.564e-7■■■□□ 16.9
LTBP3-210ENST00000528516 ADRB2P07550 413 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 RARBP10826 455 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 HABP4Q5JVS0 413 aaKnown RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 TMEM63BQ5T3F8 832 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 PCDHB18PQ96TA0 734 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 TDRKHQ9Y2W6 561 aaKnown RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 MOCS2O96007 188 aaPredicted RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 SNX16P57768 344 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 MRPS9P82933 396 aaKnown RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 IYDQ6PHW0 289 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 ULK2Q8IYT8 1036 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 GSTCDQ8NEC7 633 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 FEZF2Q8TBJ5 459 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 ACAP3Q96P50 834 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 GCNAQ96QF7 691 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 CYP26B1Q9NR63 512 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
LTBP3-210ENST00000528516 BTAF1O14981 1849 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 FSCN2O14926 492 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 ICAM1P05362 532 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 MUTP22033 750 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 TMEM259Q4ZIN3 620 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 RHBDF2Q6PJF5 856 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 B3GNT6Q6ZMB0 384 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 KLC2Q9H0B6 622 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 KLK14Q9P0G3 267 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 FRMPD4Q14CM0 1322 aa18.57■□□□□ 0.56
LTBP3-210ENST00000528516 GOLGA8CPA6NN73 597 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 F8VP50 259 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 ROR1Q01973 937 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 POU5F1BQ06416 359 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 EFTUD2Q15029 972 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■□□ 16.5
LTBP3-210ENST00000528516 PDK3Q15120 406 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 DPY19L2P1Q6NXN4 242 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 PID1Q7Z2X4 250 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 GDPD5Q8WTR4 605 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 TLE6Q9H808 572 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 ARHGEF38Q9NXL2 777 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 COL1A1P02452 1464 aaPredicted RBP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 TCEA3O75764 348 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms