RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 MCRS1Q96EZ8 462 aa7.48□□□□□ -1.21
CTNND1-218ENST00000528232 CYP3A43Q9HB55 503 aa7.48□□□□□ -1.21
CTNND1-218ENST00000528232 NPHS2Q9NP85 383 aa7.48□□□□□ -1.21
CTNND1-218ENST00000528232 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNND1-218ENST00000528232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.48□□□□□ -1.213e-7■■□□□ 14.4
CTNND1-218ENST00000528232 KIF17Q9P2E2 1029 aa7.48□□□□□ -1.21
CTNND1-218ENST00000528232 CHORDC1Q9UHD1 332 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-218ENST00000528232 SIK3Q9Y2K2 1263 aa7.48□□□□□ -1.21
CTNND1-218ENST00000528232 VWA5AO00534 786 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RARBP10826 455 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SPRP35270 261 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RARRES1P49788 294 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PTENP60484 403 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 C1QBPQ07021 282 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CXCL9Q07325 125 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 VEPH1Q14D04 833 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CYTH1Q15438 398 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CEP78Q5JTW2 689 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 METTL7BQ6UX53 244 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 NOP9Q86U38 636 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CDH24Q86UP0 819 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PARD3BQ8TEW8 1205 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RGPD8O14715 1765 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PIK3CDO00329 1044 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 KLRC4O43908 158 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 HSPA1AP0DMV8 641 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 HSPA1BP0DMV9 641 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CACNA2D1P54289 1103 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 NLRP11P59045 1033 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PURAQ00577 322 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 TMEM62Q0P6H9 643 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RABGAP1LQ5R372 815 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 LVRNQ6Q4G3 990 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 TRIM69Q86WT6 500 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 OR6P1Q8NGX9 317 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SLC7A14Q8TBB6 771 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SLC26A7Q8TE54 656 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 TFB1MQ8WVM0 346 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SLC35C1Q96A29 364 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 MAGED4Q96JG8 741 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PLGRKTQ9HBL7 147 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ALG13Q9NP73 1137 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 OSGEPQ9NPF4 335 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 KCNH4Q9UQ05 1017 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 KLHL2O95198 593 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 TGFB3P10600 412 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ATP4AP20648 1035 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 MAGEA8P43361 318 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CCNG2Q16589 344 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 FOXR2Q6PJQ5 311 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 C16orf89Q6UX73 402 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 B3GNT6Q6ZMB0 384 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SPOCD1Q6ZMY3 1216 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CCDC103Q8IW40 242 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PDCD6IPQ8WUM4 868 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 MTMR8Q96EF0 704 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CCDC90BQ9GZT6 254 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 PCMTD2Q9NV79 361 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SFMBT1Q9UHJ3 866 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 COL14A1Q05707 1796 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 GRIN3BO60391 1043 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 C6orf222P0C671 652 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 STAG3L1P0CL83 205 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 GCNT1Q02742 428 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SCRN3Q0VDG4 424 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ITGA9Q13797 1035 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RBBP7Q16576 425 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 SLC30A10Q6XR72 485 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ABHD8Q96I13 439 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 KLHL31Q9H511 634 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 MANSC1Q9H8J5 431 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.47□□□□□ -1.212e-7■■□□□ 14.4
CTNND1-218ENST00000528232 STOML2Q9UJZ1 356 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 GRID1Q9ULK0 1009 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 NID2Q14112 1375 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ROBO3Q96MS0 1386 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 EVPLLA8MZ36 301 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CLPTM1O96005 669 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 AARSP49588 968 aaKnown RBP eCLIP7.47□□□□□ -1.213e-6■□□□□ 10.9
CTNND1-218ENST00000528232 ALDH18A1P54886 795 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 RUNDC3AQ59EK9 446 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ATAD3BQ5T9A4 648 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ZNF662Q6ZS27 426 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ARHGEF19Q8IW93 802 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ABRAQ8N0Z2 381 aa7.47□□□□□ -1.21
CTNND1-218ENST00000528232 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
CTNND1-218ENST00000528232 ATXN8OSP0DMR3 200 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 ODC1P11926 461 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 RUNX1T1Q06455 604 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 IL17AQ16552 155 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 IMPG1Q17R60 797 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 SEZ6Q53EL9 994 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 DCAF6Q58WW2 860 aa7.46□□□□□ -1.21
CTNND1-218ENST00000528232 NBPF12Q5TAG4 269 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-218ENST00000528232 PPP4R4Q6NUP7 873 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms