RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 FBXO4Q9UKT5 387 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 KIAA1257Q9ULG3 409 aa12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 NDRG2Q9UN36 371 aaKnown RBP12.81□□□□□ -0.36
TRAPPC4-209ENST00000528230 MYO16Q9Y6X6 1858 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 LAMTOR5O43504 91 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 SOX9P48436 509 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 IFNAR2P48551 515 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZXDBP98169 803 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 LRRC32Q14392 662 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZNF528Q3MIS6 628 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 UBR7Q8N806 425 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 EHBP1Q8NDI1 1231 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 LMO3Q8TAP4 145 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 ATP2A3Q93084 1043 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 EXOC4Q96A65 974 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 NT5C1BQ96P26 610 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 GBP4Q96PP9 640 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 ARID3AQ99856 593 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 TLR8Q9NR97 1041 aaKnown RBP12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 SCML2Q9UQR0 700 aa12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAPPC4-209ENST00000528230 LEFTY2O00292 366 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 TRDMT1O14717 391 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 SLC9A3R1O14745 358 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 AFPP02771 609 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 SP9P0CG40 484 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 MRE11P49959 708 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 KIF11P52732 1056 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 SLC8A3P57103 927 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 NR1H3Q13133 447 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 EML3Q32P44 896 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 TRIM68Q6AZZ1 485 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 TXNDC11Q6PKC3 985 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 MAML2Q8IZL2 1156 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 CPA6Q8N4T0 437 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 ANKRD52Q8NB46 1076 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 NUP62CLQ9H1M0 184 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 GMIPQ9P107 970 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 CPQQ9Y646 472 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 USP3Q9Y6I4 520 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
TRAPPC4-209ENST00000528230 OTOL1A6NHN0 477 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 COCHO43405 550 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 PAEPP09466 180 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 MBL2P11226 248 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 VDRP11473 427 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 ARSAP15289 507 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 ACO1P21399 889 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 PSEN1P49768 467 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 GCNT1Q02742 428 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 LRMPQ12912 555 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 MTAPQ13126 283 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 PON2Q15165 354 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 TMEM196Q5HYL7 178 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 MED15Q96RN5 788 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 CYLDQ9NQC7 956 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 TBC1D14Q9P2M4 693 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 WNT6Q9Y6F9 365 aa12.78□□□□□ -0.36
TRAPPC4-209ENST00000528230 E2F8A0AVK6 867 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 NFATC1O95644 943 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 GJA4P35212 333 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCR3P51677 355 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCINQ13939 588 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 PPP2R5DQ14738 602 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 KLHDC10Q6PID8 442 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZC3H14Q6PJT7 736 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 GPRIN1Q7Z2K8 1008 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 ADGRG2Q8IZP9 1017 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 PPM1KQ8N3J5 372 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 SPEM1Q8N4L4 309 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 NELL1Q92832 810 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms