RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	CD9	P21926	228 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CTGF	P29279	349 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	APOBEC3A	P31941	199 aa	Predicted RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	BMPR1A	P36894	532 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	STAT6	P42226	847 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ACADSB	P45954	432 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	EVA1C	P58658	441 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	KRTAP10-7	P60409	375 aa	Predicted RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	DR1	Q01658	176 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	IK	Q13123	557 aa	Predicted RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	DPYS	Q14117	519 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	SEPT2	Q15019	361 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	PPP2R5B	Q15173	497 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ADRM1	Q16186	407 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CFAP100	Q494V2	611 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	NCAPH2	Q6IBW4	605 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	WDR93	Q6P2C0	686 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	GIMAP6	Q6P9H5	292 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	TRIM65	Q6PJ69	517 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	RBM43	Q6ZSC3	357 aa	Known RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	GDF7	Q7Z4P5	450 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	BRSK2	Q8IWQ3	736 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	LILRB2	Q8N423	598 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	TMCO5A	Q8N6Q1	288 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ARL6IP6	Q8N6S5	226 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	IGSF22	Q8N9C0	903 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	GLB1L3	Q8NCI6	653 aa	Predicted RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	STKLD1	Q8NE28	680 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	GSTCD	Q8NEC7	633 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	GSDMB	Q8TAX9	411 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	WDR60	Q8WVS4	1066 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ZFPM2	Q8WW38	1151 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CAVIN3	Q969G5	261 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ERP27	Q96DN0	273 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	STAMBPL1	Q96FJ0	436 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	SNF8	Q96H20	258 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	C8orf48	Q96LL4	319 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CATSPER2	Q96P56	530 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	DCLRE1C	Q96SD1	692 aa	Known RBP	3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	TINF2	Q9BSI4	451 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	DHRS4	Q9BTZ2	278 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	DRC3	Q9H069	523 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ZCWPW1	Q9H0M4	648 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	VCX	Q9H320	206 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	SLC52A2	Q9HAB3	445 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	AKIP1	Q9NQ31	210 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	RMND1	Q9NWS8	449 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	TRPM5	Q9NZQ8	1165 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	IP6K2	Q9UHH9	426 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	MTUS1	Q9ULD2	1270 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CCPG1	Q9ULG6	757 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	ASAP1	Q9ULH1	1129 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	MSRB2	Q9Y3D2	182 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	L3MBTL1	Q9Y468	752 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CHST2	Q9Y4C5	530 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	FADS3	Q9Y5Q0	445 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	AKAP12	Q02952	1782 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	CASZ1	Q86V15	1759 aa		3.97	□□□□□ -1.77
CLNS1A-209	ENST00000527299	EFCAB5	A4FU69	1503 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299		A0A0B4J203	849 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299		A0A1B0GVL5	298 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	UBA6	A0AVT1	1052 aa	Predicted RBP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	PIPSL	A2A3N6	862 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	CFAP73	A6NFT4	308 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	BTBD19	C9JJ37	291 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	GOLGA8K	D6RF30	607 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299		E7ENQ6	273 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299		H0YC42	278 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	IDH3B	O43837	385 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	SNX2	O60749	519 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	EFCAB14	O75071	495 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	ZNF254	O75437	659 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	SUPT3H	O75486	399 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	NCR1	O76036	304 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	CFB	P00751	764 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	KRT14	P02533	472 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	HNRNPC	P07910	306 aa	Known RBP eCLIP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	GSTA1	P08263	222 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	TCF3	P15923	654 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	KCNA6	P17658	529 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	PTPN2	P17706	415 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	CCND1	P24385	295 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	NFKBIA	P25963	317 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	CXCR5	P32302	372 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	SLC16A2	P36021	539 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	GPC3	P51654	580 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	RARS	P54136	660 aa	Known RBP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	TPD52	P55327	224 aa	Predicted RBP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	BCAR1	P56945	870 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	GNGT1	P63211	74 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	ELF3	P78545	371 aa	Predicted RBP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	CYP4A11	Q02928	519 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	HSPA14	Q0VDF9	509 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	KCTD2	Q14681	263 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	NDUFA5	Q16718	116 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	SHROOM1	Q2M3G4	852 aa	Predicted RBP	3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	PROSER3	Q2NL68	480 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	BEAN1	Q3B7T3	259 aa		3.96	□□□□□ -1.78
CLNS1A-209	ENST00000527299	PDCD4	Q53EL6	469 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms