RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 SYT15Q9BQS2 421 aa16.97■□□□□ 0.31
SNRNP35-204ENST00000527158 FTHL17Q9BXU8 183 aa16.97■□□□□ 0.31
SNRNP35-204ENST00000527158 FAM129AQ9BZQ8 928 aa16.97■□□□□ 0.31
SNRNP35-204ENST00000527158 CDH9Q9ULB4 789 aa16.97■□□□□ 0.31
SNRNP35-204ENST00000527158 C3orf70A6NLC5 250 aaPredicted RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 C9IYK1 514 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 DNM1LO00429 736 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 PCSK1P29120 753 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ATP11AP98196 1134 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ADCY2Q08462 1091 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 MBTPS1Q14703 1052 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 TTC31Q49AM3 519 aaPredicted RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 SH3PXD2AQ5TCZ1 1133 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 LRRC8DQ7L1W4 858 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ARCQ7LC44 396 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 PIGZQ86VD9 579 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 SPATA18Q8TC71 538 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ARL8AQ96BM9 186 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ZDHHC18Q9NUE0 388 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 MTRF1LQ9UGC7 380 aaKnown RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ASIC3Q9UHC3 531 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 DSEQ9UL01 958 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 DNAH12Q6ZR08 3092 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ARHGEF37A1IGU5 675 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 CLDN5O00501 218 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 FAM200BP0CF97 657 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 SELPP16109 830 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 BFSP2Q13515 415 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 PTK6Q13882 451 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 BOLA3Q53S33 107 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 EFHC1Q5JVL4 640 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 DRICH1Q6PGQ1 229 aaPredicted RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ZNF365Q70YC5 407 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 ATP6V1G3Q96LB4 118 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 NGRNQ9NPE2 291 aaKnown RBP16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 CRTAC1Q9NQ79 661 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 GRHL1Q9NZI5 618 aa16.96■□□□□ 0.31
SNRNP35-204ENST00000527158 INPPL1O15357 1258 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 LIASO43766 372 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 CCT5P48643 541 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 CDK7P50613 346 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 BYSLQ13895 437 aaKnown RBP16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 KIAA0319Q5VV43 1072 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 SCYL2Q6P3W7 929 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 PAQR9Q6ZVX9 377 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 TTC13Q8NBP0 860 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 FBXO25Q8TCJ0 367 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 KCTD13Q8WZ19 329 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 BEGAINQ9BUH8 593 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 ITIH2P19823 946 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 PTPN9P43378 593 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM189BP81408 668 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 TAZQ16635 292 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 PAN2Q504Q3 1202 aaKnown RBP16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 ZDHHC24Q6UX98 284 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 TMC3Q7Z5M5 1100 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 MAP7D3Q8IWC1 876 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 CCDC89Q8N998 374 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 URGCPQ8TCY9 931 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 CLEC4CQ8WTT0 213 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 CALN1Q9BXU9 219 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 MAK16Q9BXY0 300 aaKnown RBP16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 WHRNQ9P202 907 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 GGA2Q9UJY4 613 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 ZNF148Q9UQR1 794 aa16.95■□□□□ 0.3
SNRNP35-204ENST00000527158 MYBPHLA2RUH7 354 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 NR1D1P20393 614 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 ADIGQ0VDE8 80 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CLEC20AQ6ZU45 233 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 MYCBPAPQ8TBZ2 947 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 PIK3R5Q8WYR1 880 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 ART4Q93070 314 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 FRMD8P1Q9BZ68 369 aaPredicted RBP16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 KRT82Q9NSB4 513 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 DRG1Q9Y295 367 aaKnown RBP16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 HTTP42858 3142 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 I3L4J1 428 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CST8O60676 142 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CYP11A1P05108 521 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 ATF2P15336 505 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 HSD17B3P37058 310 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 ADCY8P40145 1251 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 BRCC3P46736 316 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 CDH6P55285 790 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 MAP3K7CLP57077 242 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 BBS12Q6ZW61 710 aa16.94■□□□□ 0.3
SNRNP35-204ENST00000527158 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms