RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 F5P12259 2224 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 SCAMP3O14828 347 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 GNA14O95837 355 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 OLFM2O95897 454 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 AFPP02771 609 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 DCNP07585 359 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ZDHHC11BP0C7U3 371 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF18P17022 549 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 HDCP19113 662 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 AOC1P19801 751 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ANXA13P27216 316 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 YWHAQP27348 245 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 CLCN5P51795 746 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 SLC5A3P53794 718 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF445P59923 1031 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 MYL5Q02045 173 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 IQCB1Q15051 598 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 MLF2Q15773 248 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ARHGAP15Q53QZ3 475 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 MIIPQ5JXC2 388 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 NAIF1Q69YI7 327 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 TRIM68Q6AZZ1 485 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 TXNDC11Q6PKC3 985 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 CREBRFQ8IUR6 639 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 CELF5Q8N6W0 485 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 NDRG1Q92597 394 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 MRPS31Q92665 395 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 JAKMIP2Q96AA8 810 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 CEP295NLQ96MC4 621 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 HEXIM2Q96MH2 286 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 DUSP16Q9BY84 665 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 INTS2Q9H0H0 1204 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 LINC00597Q9H2U6 94 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 THAP9Q9H5L6 903 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 CCSER2Q9H7U1 834 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 BRD9Q9H8M2 597 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 NMUR1Q9HB89 426 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 SIX2Q9NPC8 291 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 DMAP1Q9NPF5 467 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 ACP6Q9NPH0 428 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 HPS4Q9NQG7 708 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 GKN1Q9NS71 199 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 TDP1Q9NUW8 608 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 GMIPQ9P107 970 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.38□□□□□ -0.91
CCDC90B-208ENST00000527025 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 MYOFQ9NZM1 2061 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ANTXRLA6NF34 631 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 SOBPA7XYQ1 873 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF263O14978 683 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CHADO15335 359 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 P4HA2O15460 535 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CYP26A1O43174 497 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 TBX18O95935 607 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 OAS1P00973 400 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 FAM200BP0CF97 657 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ARSAP15289 507 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 TARSP26639 723 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 PON1P27169 355 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 HOXC13P31276 330 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF132P52740 706 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 KCNMA1Q12791 1236 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF268Q14587 947 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ZNF77Q15935 545 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 PKDCCQ504Y2 493 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 LRSAM1Q6UWE0 723 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 TPRG1Q6ZUI0 275 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 SCD5Q86SK9 330 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 SUGP1Q8IWZ8 645 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CCDC105Q8IYK2 499 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CCDC150Q8NCX0 1101 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 UBA3Q8TBC4 463 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 BPIFB1Q8TDL5 484 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 DEPDC1BQ8WUY9 529 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 ZFRQ96KR1 1074 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 PHOX2BQ99453 314 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 MFSD1Q9H3U5 465 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 FBRSL1Q9HCM7 1045 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 TRPV5Q9NQA5 729 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 OBP2AQ9NY56 170 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 UXTQ9UBK9 157 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CNTN6Q9UQ52 1028 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 CACNA1IQ9P0X4 2223 aa9.37□□□□□ -0.91
CCDC90B-208ENST00000527025 TRAV19A0A0A6YYK7 116 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 KANSL1LA0AUZ9 987 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 BECN2A8MW95 431 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 O00370 1275 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 COCHO43405 550 aa9.36□□□□□ -0.91
CCDC90B-208ENST00000527025 GREM1O60565 184 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms