RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 PSAPL1Q6NUJ1 521 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 C12orf56Q8IXR9 622 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 TXNDC5Q8NBS9 432 aaKnown RBP12.95□□□□□ -0.34
COLCA1-202ENST00000526150 MDGA1Q8NFP4 955 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 DUSP9Q99956 384 aaKnown RBP12.95□□□□□ -0.34
COLCA1-202ENST00000526150 MED10Q9BTT4 135 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 NACA2Q9H009 215 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 ARHGEF4Q9NR80 690 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 FAM13BQ9NYF5 915 aa12.95□□□□□ -0.34
COLCA1-202ENST00000526150 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
COLCA1-202ENST00000526150 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
COLCA1-202ENST00000526150 CHD8Q9HCK8 2581 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 LNP1A1A4G5 178 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TBC1D3BA6NDS4 549 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TNFRSF10BO14763 440 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 CSRP1P21291 193 aaKnown RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 HOXD13P35453 343 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TIE1P35590 1138 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 MYL6P60660 151 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 ZXDBP98169 803 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 BIRC3Q13489 604 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 SNX30Q5VWJ9 437 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TCEAL6Q6IPX3 200 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 RHBDF2Q6PJF5 856 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 RABEPKQ7Z6M1 372 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 PGBD3Q8N328 593 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 GLIS3Q8NEA6 775 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 PIGKQ92643 395 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TCEAL3Q969E4 200 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF518BQ9C0D4 1074 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 FBXO44Q9H4M3 255 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 SLC32A1Q9H598 525 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 TFIP11Q9UBB9 837 aaKnown RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
COLCA1-202ENST00000526150 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
COLCA1-202ENST00000526150 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
COLCA1-202ENST00000526150 AP5Z1O43299 807 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
COLCA1-202ENST00000526150 HOXD12P35452 270 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 P2RY2P41231 377 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 SLC6A11P48066 632 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
COLCA1-202ENST00000526150 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 GAB4Q2WGN9 574 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 SDE2Q6IQ49 451 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 SLC36A4Q6YBV0 504 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 SYT12Q8IV01 421 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 ALLCQ8N6M5 410 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 SCFD1Q8WVM8 642 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
COLCA1-202ENST00000526150 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 CLDN5O00501 218 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 HOXC11O43248 304 aaPredicted RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 COCHO43405 550 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 PROS1P07225 676 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF252P-AS1Q0IIN9 211 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 SGSM1Q2NKQ1 1148 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 TRIM61Q5EBN2 209 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 SH3PXD2AQ5TCZ1 1133 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 ZNF513Q8N8E2 541 aaPredicted RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 CEP76Q8TAP6 659 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 TAF4BQ92750 862 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 XPO6Q96QU8 1125 aaKnown RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 XYLT2Q9H1B5 865 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 DPEP3Q9H4B8 488 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 SPHK2Q9NRA0 654 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 IL37Q9NZH6 218 aa12.92□□□□□ -0.34
COLCA1-202ENST00000526150 CHORDC1Q9UHD1 332 aaPredicted RBP12.92□□□□□ -0.34
COLCA1-202ENST00000526150 MYOFQ9NZM1 2061 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms